Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 0.0e+00 1247.3 761 100.0
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 4.2e-296 1021.1 781 83.7
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.0e-289 1000.0 787 79.9
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 2.0e-282 975.7 786 78.0
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 2.6e-253 879.0 800 74.4
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 9.6e-240 833.9 763 74.3
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 1.1e-232 810.4 828 66.5
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 7.6e-229 797.7 828 65.8
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 4.8e-223 778.5 862 64.4
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 4.8e-223 778.5 862 64.4
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.1e-222 777.3 839 66.0
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.8e-222 776.5 834 65.1
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.4e-203 713.8 866 58.2
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 1.5e-147 527.7 857 50.8
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.5e-80 305.1 865 35.4
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.3e-79 302.0 792 38.3
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 8.5e-79 299.3 804 38.7
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.5e-78 297.7 807 36.8
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 4.2e-78 297.0 802 37.8
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.2e-77 295.4 857 35.0
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 2.1e-77 294.7 897 35.5
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 2.7e-77 294.3 810 37.2
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.0e-76 292.4 810 38.6
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 1.8e-76 291.6 857 34.8
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 3.9e-76 290.4 812 34.5
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 2.0e-75 288.1 813 35.5
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 5.7e-75 286.6 813 36.8
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 2.2e-74 284.6 809 37.2
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 3.5e-72 277.3 844 35.5
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 4.2e-70 270.4 823 34.1
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.7e-69 267.7 597 40.0
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 2.3e-68 264.6 777 36.4
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 8.8e-68 262.7 641 36.7
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 3.1e-65 254.2 596 42.4
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 5.3e-65 253.4 822 34.5
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 9.1e-65 252.7 625 39.4
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.6e-64 251.9 769 36.2
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.0e-64 251.5 786 35.8
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 2.6e-64 251.1 650 38.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 4.5e-64 250.4 812 35.7
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 2.5e-62 244.6 720 34.0
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 3.2e-62 244.2 830 32.7
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 7.2e-62 243.0 827 33.7
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.6e-61 241.9 726 39.3
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 5.2e-60 236.9 791 33.0
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 1.5e-59 235.3 788 33.4
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 2.6e-59 234.6 661 37.1
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 3.4e-59 234.2 634 39.4
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 3.4e-59 234.2 813 33.3
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 9.8e-59 232.6 836 33.5
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 6.3e-58 229.9 655 37.6
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 8.3e-58 229.6 811 34.4
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 1.1e-57 229.2 802 30.5
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 1.8e-57 228.4 821 32.0
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 2.4e-57 228.0 634 33.6
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 2.4e-57 228.0 814 31.7
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 4.1e-57 227.3 591 36.5
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 4.1e-57 227.3 641 41.7
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 4.1e-57 227.3 819 33.7
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 1.6e-56 225.3 690 33.6
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 1.6e-56 225.3 817 34.1
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 5.9e-56 223.4 789 33.5
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 7.7e-56 223.0 789 32.1
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 1.7e-55 221.9 616 39.1
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 6.5e-55 219.9 584 37.2
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 1.5e-54 218.8 682 35.5
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 7.2e-54 216.5 599 37.2
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 6.1e-53 213.4 586 40.1
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 1.8e-52 211.8 819 31.4
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 4.0e-52 210.7 597 37.0
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 8.8e-52 209.5 609 35.6
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.2e-51 209.1 834 34.2
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 9.8e-51 206.1 828 31.5
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 1.3e-50 205.7 609 36.5
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 3.7e-50 204.1 651 38.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 4.1e-49 200.7 798 36.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.0e-47 196.1 611 35.5
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 2.3e-47 194.9 619 32.5
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 2.3e-47 194.9 828 30.3
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 6.6e-47 193.4 642 33.2
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.1e-46 192.6 574 36.1
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 1.6e-45 188.7 817 33.7
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 4.0e-44 184.1 718 32.0
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 7.5e-43 179.9 604 35.1
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 9.8e-43 179.5 615 33.8
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 6.4e-42 176.8 614 33.6
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 3.2e-41 174.5 645 31.2
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 2.7e-40 171.4 536 33.8
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 3.3e-38 164.5 784 30.1
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 5.2e-36 157.1 568 34.9
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 5.2e-36 157.1 568 34.9
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 3.4e-35 154.5 638 32.3
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 5.4e-33 147.1 579 32.6
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 7.0e-33 146.7 601 32.3
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 2.0e-32 145.2 291 40.5
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 4.6e-32 144.1 659 32.6
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.1e-30 139.4 823 32.2
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 1.9e-30 138.7 621 30.3
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.5e-30 138.3 378 34.4
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.4e-28 132.5 642 28.7
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 4.9e-26 124.0 623 32.7
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.2e-21 109.4 802 28.1
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 2.4e-17 95.1 659 25.3
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 7.1e-17 93.6 330 32.1
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 2.7e-16 91.7 832 25.8
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 7.8e-16 90.1 627 25.8
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 2.3e-15 88.6 207 38.6
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 1.9e-14 85.5 562 28.6
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 1.8e-12 79.0 250 35.6
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 2.6e-11 75.1 727 26.0
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 6.0e-08 63.9 151 41.7
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 9.6e-06 56.6 150 35.3


User provided reference genes

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