Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 5.7e-58 227.3 106 100.0
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 2.0e-55 218.8 104 96.2
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.8e-51 205.7 104 88.5
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 4.0e-51 204.5 104 86.5
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 3.7e-49 198.0 104 84.6
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.2e-47 193.0 104 81.7
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 2.9e-46 188.3 102 81.4
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 2.5e-45 185.3 103 81.6
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 3.2e-45 184.9 106 79.2
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 4.2e-45 184.5 103 81.6
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 4.2e-45 184.5 103 81.6
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 4.7e-44 181.0 104 76.9
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 4.7e-44 181.0 104 76.9
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 8.8e-43 176.8 109 73.4
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 8.8e-43 176.8 109 73.4
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-42 176.4 103 77.7
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.6e-42 175.3 104 76.0
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 2.8e-41 171.8 102 77.5
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.9e-41 171.0 103 76.7
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 1.6e-39 166.0 101 71.3
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 1.4e-35 152.9 101 62.4
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.8e-35 152.5 95 69.5
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 2.3e-35 152.1 101 66.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 4.0e-35 151.4 101 64.4
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 5.2e-35 151.0 103 62.1
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 5.2e-35 151.0 103 62.1
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 8.9e-35 150.2 103 62.1
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.9e-35 150.2 103 62.1
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 8.9e-35 150.2 103 63.1
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 2.0e-34 149.1 101 64.4
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.6e-34 148.7 101 63.4
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 2.6e-34 148.7 101 62.4
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 5.7e-34 147.5 101 62.4
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 5.7e-34 147.5 100 62.0
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 7.5e-34 147.1 102 62.7
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 7.5e-34 147.1 103 63.1
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.3e-33 146.4 100 61.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.3e-33 146.4 100 61.0
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.3e-33 146.4 103 62.1
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.3e-33 146.4 103 63.1
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.7e-33 146.0 101 61.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 3.7e-33 144.8 101 63.4
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 3.7e-33 144.8 101 62.4
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 8.3e-33 143.7 101 61.4
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.8e-32 142.5 103 60.2
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 5.4e-32 141.0 101 60.4
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.0e-32 140.6 98 60.2
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.0e-32 140.6 98 60.2
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 7.0e-32 140.6 98 60.2
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.6e-31 139.4 104 58.7
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 2.7e-31 138.7 104 57.7
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 2.7e-31 138.7 90 65.6
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 4.6e-31 137.9 101 58.4
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 4.6e-31 137.9 94 61.7
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.9e-31 137.5 101 57.4
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 5.9e-31 137.5 104 56.7
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 7.8e-31 137.1 100 61.0
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.0e-30 136.7 102 56.9
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.0e-30 136.7 102 56.9
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 1.3e-30 136.3 92 64.1
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.7e-30 136.0 100 56.0
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.9e-30 134.8 100 58.0
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.0e-30 134.4 89 62.9
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 3.3e-29 131.7 99 58.6
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 7.3e-29 130.6 94 59.6
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.1e-28 129.0 97 56.7
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 6.2e-28 127.5 84 65.5
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 6.2e-28 127.5 90 58.9
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.0e-27 126.7 87 60.9
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.0e-27 126.7 100 52.0
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.0e-27 126.7 66 75.8
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 3.1e-27 125.2 91 61.5
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.0e-26 122.5 96 60.4
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.6e-26 122.1 96 57.3
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 5.8e-26 120.9 96 57.3
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 5.8e-26 120.9 63 74.6
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 7.5e-26 120.6 99 53.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 2.2e-25 119.0 98 55.1
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 2.9e-25 118.6 87 63.2
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.9e-25 117.9 99 49.5
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 6.4e-25 117.5 101 51.5
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.9e-24 115.9 102 51.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.2e-24 115.2 100 48.0
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 3.2e-24 115.2 98 55.1
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 3.2e-24 115.2 98 55.1
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.6e-23 112.8 88 55.7
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.6e-23 112.8 96 53.1
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.7e-23 112.1 82 62.2
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 6.0e-23 110.9 79 60.8
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 6.0e-23 110.9 96 53.1
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 7.8e-23 110.5 96 55.2
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.0e-22 110.2 95 52.6
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 3.0e-22 108.6 89 52.8
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 6.6e-22 107.5 63 68.3
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 8.6e-22 107.1 97 51.5
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 8.6e-22 107.1 96 50.0
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.1e-21 106.7 118 44.9
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.5e-21 106.3 80 57.5
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 7.3e-21 104.0 74 60.8
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 7.3e-21 104.0 87 50.6
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 9.5e-21 103.6 109 46.8
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 2.8e-20 102.1 94 44.7
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.3e-19 99.0 113 45.1
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 6.8e-19 97.4 49 81.6
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.2e-18 96.7 51 74.5
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 7.5e-18 94.0 48 77.1
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 9.8e-18 93.6 86 51.2
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 3.1e-11 72.0 93 37.6
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 3.2e-08 62.0 98 34.7


User provided reference genes

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