Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G33990 Arabidopsis lyrata HOM05D000186 ORTHO05D038590 2.5e-26 121.3 60 100.0
AT1G74088 Arabidopsis thaliana HOM05D000186 ORTHO05D038590 8.6e-11 69.7 65 63.1
Thhalv10007318m.g Eutrema salsugineum HOM05D000186 ORTHO05D002091 6.8e-08 60.1 77 49.4
BcaB03g12989 Brassica carinata HOM05D000186 ORTHO05D002091 8.9e-08 59.7 78 48.7
BcaB03g14495 Brassica carinata HOM05D000186 ORTHO05D002091 8.9e-08 59.7 78 48.7
Lj4g0019642 Lotus japonicus HOM05D000186 ORTHO05D002091 1.5e-07 58.9 79 49.4
Sp1g16540 Schrenkiella parvula HOM05D000186 ORTHO05D002091 1.5e-07 58.9 77 48.1
AT1G18580 Arabidopsis thaliana HOM05D000186 ORTHO05D002091 2.6e-07 58.2 79 48.1
Sp1g16550 Schrenkiella parvula HOM05D000186 ORTHO05D002091 2.6e-07 58.2 77 48.1
THA.LOC104812114 Tarenaya hassleriana HOM05D000186 ORTHO05D002091 2.6e-07 58.2 79 48.1
Aa31LG7G3340 Aethionema arabicum HOM05D000186 ORTHO05D002091 3.4e-07 57.8 77 48.1
CARHR019200 Cardamine hirsuta HOM05D000186 ORTHO05D002091 3.4e-07 57.8 79 45.6
AL1G31020 Arabidopsis lyrata HOM05D000186 ORTHO05D002091 4.4e-07 57.4 79 48.1
Carub.0001s1821 Capsella rubella HOM05D000186 ORTHO05D002091 4.4e-07 57.4 79 48.1
Actinidia10446 Actinidia chinensis HOM05D000186 ORTHO05D002091 9.9e-07 56.2 79 46.8
Actinidia12736 Actinidia chinensis HOM05D000186 ORTHO05D002091 9.9e-07 56.2 79 46.8
Actinidia04800 Actinidia chinensis HOM05D000186 ORTHO05D002091 1.7e-06 55.5 79 46.8
arahy.Tifrunner.gnm1.ann1.11TW0N Arachis hypogaea HOM05D000186 ORTHO05D002091 1.7e-06 55.5 79 46.8
arahy.Tifrunner.gnm1.ann1.WQLB21 Arachis hypogaea HOM05D000186 ORTHO05D002091 1.7e-06 55.5 79 46.8
C08p18720 Brassica napus HOM05D000186 ORTHO05D002091 2.2e-06 55.1 79 46.8
Gohir.D11G037200 Gossypium hirsutum HOM05D000186 ORTHO05D002091 2.2e-06 55.1 79 46.8
Oeu044772.1 Olea europaea HOM05D000186 ORTHO05D002091 2.2e-06 55.1 79 44.3
Prupe.5G208900 Prunus persica HOM05D000186 ORTHO05D002091 2.2e-06 55.1 79 45.6
Thecc.03G107200 Theobroma cacao HOM05D000186 ORTHO05D002091 2.2e-06 55.1 79 46.8
BcaB07g31876 Brassica carinata HOM05D000186 ORTHO05D002091 3.7e-06 54.3 79 45.6
BcaC07g38920 Brassica carinata HOM05D000186 ORTHO05D002091 3.7e-06 54.3 79 46.8
BolC8t49497H Brassica oleracea HOM05D000186 ORTHO05D002091 3.7e-06 54.3 79 46.8
Gohir.A11G033800 Gossypium hirsutum HOM05D000186 ORTHO05D002091 3.7e-06 54.3 79 45.6
Lalb_Chr12g0197351 Lupinus albus HOM05D000186 ORTHO05D002091 3.7e-06 54.3 79 46.8
Phvul.003G182500 Phaseolus vulgaris HOM05D000186 ORTHO05D002091 3.7e-06 54.3 79 46.8
AUR62039671 Chenopodium quinoa HOM05D000186 ORTHO05D002091 4.9e-06 53.9 79 44.3
Dinv17455 Davidia involucrata HOM05D000186 ORTHO05D002091 4.9e-06 53.9 79 45.6
Prupe.5G209400 Prunus persica HOM05D000186 ORTHO05D002091 4.9e-06 53.9 79 44.3
EL10Ac5g11186 Beta vulgaris HOM05D000186 ORTHO05D002091 6.4e-06 53.5 79 43.0
A08p30340 Brassica napus HOM05D000186 ORTHO05D002091 6.4e-06 53.5 75 46.7
BraA08t34967Z Brassica rapa HOM05D000186 ORTHO05D002091 6.4e-06 53.5 75 46.7
COL.COLO4_34347 Corchorus olitorius HOM05D000186 ORTHO05D002091 6.4e-06 53.5 79 46.8
Dinv31040 Davidia involucrata HOM05D000186 ORTHO05D002091 6.4e-06 53.5 79 45.6
Dinv31060 Davidia involucrata HOM05D000186 ORTHO05D002091 6.4e-06 53.5 79 45.6
TWI81G0922 Tripterygium wilfordii HOM05D000186 ORTHO05D002091 6.4e-06 53.5 79 45.6
Oeu014426.1 Olea europaea HOM05D000186 ORTHO05D002091 8.4e-06 53.1 79 44.3


User provided reference genes

Program Settings