Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 0.0e+00 1550.8 804 100.0
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 0.0e+00 1439.5 805 92.8
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 0.0e+00 1379.8 804 88.8
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 0.0e+00 1368.2 805 88.4
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 0.0e+00 1350.5 807 87.9
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 0.0e+00 1315.8 805 85.7
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 0.0e+00 1274.2 805 84.3
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 0.0e+00 1260.7 809 83.3
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 0.0e+00 1247.6 796 84.0
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 0.0e+00 1241.5 792 83.6
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 0.0e+00 1236.1 817 79.4
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 0.0e+00 1217.2 811 81.6
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 0.0e+00 1112.4 807 73.7
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 4.4e-251 871.7 786 59.7
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 1.8e-244 849.7 811 56.6
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 5.2e-244 848.2 805 57.0
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 1.5e-243 846.7 823 56.7
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.4e-243 845.5 811 56.5
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.8e-241 839.7 815 55.6
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 5.4e-241 838.2 798 57.4
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 4.5e-240 835.1 803 56.5
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 5.9e-240 834.7 799 55.9
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 1.0e-239 833.9 818 55.9
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 3.8e-239 832.0 798 55.9
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 6.6e-239 831.2 803 56.3
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.1e-238 830.5 831 54.6
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 4.2e-238 828.6 803 56.3
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 7.2e-238 827.8 821 54.7
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 6.8e-236 821.2 819 55.1
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.2e-235 820.5 793 55.9
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 8.3e-234 814.3 829 55.1
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 5.4e-233 811.6 796 55.8
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.2e-232 810.4 819 55.1
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.7e-232 809.3 795 56.0
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 5.9e-232 808.1 808 55.9
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 7.8e-232 807.7 829 54.2
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.8e-229 799.3 818 54.4
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.0e-227 793.1 824 54.0
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 9.8e-227 790.8 832 53.8
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.1e-220 770.8 800 52.0
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 6.8e-220 768.1 800 53.1
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 8.3e-218 761.1 824 51.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 7.1e-217 758.1 812 50.5
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 9.2e-217 757.7 824 52.1
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 9.2e-217 757.7 792 52.8
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 9.2e-217 757.7 807 51.2
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.2e-216 757.3 812 50.5
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.7e-216 756.1 799 52.1
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.0e-215 754.2 793 51.8
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.3e-215 753.1 805 51.9
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 3.3e-214 749.2 801 51.1
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 4.3e-214 748.8 804 53.1
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 9.5e-214 747.7 798 50.4
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.8e-213 746.1 789 50.8
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 3.6e-213 745.7 801 50.9
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 8.9e-212 741.1 832 49.6
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.5e-211 740.3 798 50.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.5e-211 740.3 794 50.9
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.4e-209 733.0 811 49.7
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 7.1e-209 731.5 809 50.3
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 9.2e-209 731.1 811 50.3
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.1e-208 729.9 811 49.4
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 2.7e-208 729.6 796 50.6
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.5e-208 729.2 813 51.4
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.0e-207 727.6 804 51.1
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 1.1e-206 724.2 819 50.2
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 3.3e-206 722.6 822 50.0
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 7.3e-206 721.5 790 51.3
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 7.3e-206 721.5 825 49.9
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.6e-205 720.3 807 49.2
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.8e-205 719.5 797 49.1
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.8e-205 719.5 811 49.4
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.4e-204 716.5 798 50.9
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 1.3e-202 710.7 806 49.6
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 4.6e-200 702.2 810 49.1
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.9e-199 699.1 747 50.9
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 4.3e-198 695.7 805 50.2
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 2.8e-197 693.0 718 52.5
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 4.0e-196 689.1 740 51.5
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.4e-194 681.8 795 49.4
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.9e-193 680.2 743 51.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 6.6e-191 671.8 817 47.9
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.8e-183 647.1 803 47.7
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 5.8e-179 632.1 818 43.9
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.0e-178 631.3 797 46.9
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.9e-178 629.8 652 53.5
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 2.7e-176 623.2 789 46.3
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 7.6e-171 605.1 816 42.3
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.9e-170 603.2 609 53.5
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 5.0e-170 602.4 792 45.1
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 9.3e-169 598.2 619 53.6
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 5.3e-164 582.4 787 45.1
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 4.4e-150 536.2 610 48.4
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.5e-147 526.6 741 44.8
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 4.2e-145 519.6 795 38.6
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.0e-143 513.5 555 50.8
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 5.3e-140 502.7 566 48.8
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.0e-127 461.8 483 51.8
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 2.6e-126 457.2 384 62.5
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 6.3e-125 452.6 762 39.1
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.1e-112 411.0 516 46.7
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.1e-103 382.1 746 38.6
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.1e-98 363.2 352 58.2
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.1e-87 328.9 921 28.7
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.1e-81 308.9 853 29.5
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.5e-81 307.8 275 59.3
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.8e-80 303.5 292 56.8
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.1e-75 288.1 485 41.4
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.1e-68 265.8 814 28.7
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.1e-65 255.8 304 51.0
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 8.7e-58 229.6 213 58.7
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 5.7e-57 226.9 199 61.3
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 3.8e-53 214.2 383 35.5
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.1e-51 208.4 259 44.8
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 7.4e-49 199.9 584 29.5
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 1.6e-48 198.7 531 28.2
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 9.4e-28 129.8 197 42.1
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 3.6e-19 101.3 626 22.4
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 2.0e-17 95.5 71 64.8
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 8.3e-16 90.1 214 34.6


User provided reference genes

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