Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G32880 Arabidopsis lyrata HOM05D009038 ORTHO05D010897 0.0e+00 1128.2 621 100.0
AT1G73130 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 1.1e-185 654.1 689 61.5
Carub.0002s1990 Capsella rubella HOM05D009038 ORTHO05D010897 1.2e-176 624.0 651 61.9
Sp5g28090 Schrenkiella parvula HOM05D009038 ORTHO05D010897 2.6e-86 323.9 638 38.6
CARHR066100 Cardamine hirsuta HOM05D009038 ORTHO05D010897 8.4e-85 318.9 629 39.3
Thhalv10018751m.g Eutrema salsugineum HOM05D009038 ORTHO05D010897 1.4e-71 275.0 639 36.5
BolC2t09109H Brassica oleracea HOM05D009038 ORTHO05D010897 1.5e-44 185.3 617 31.3
C02p30590 Brassica napus HOM05D009038 ORTHO05D010897 1.9e-44 184.9 617 31.3
A02p18460 Brassica napus HOM05D009038 ORTHO05D010897 6.8e-42 176.4 409 38.4
BraA02t06885Z Brassica rapa HOM05D009038 ORTHO05D010897 6.8e-42 176.4 409 38.4
Aa31LG4G3400 Aethionema arabicum HOM05D009038 ORTHO05D010897 6.1e-35 153.3 431 32.7
AT1G17780 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 8.0e-27 126.3 217 41.9
AL1G30140 Arabidopsis lyrata HOM05D009038 ORTHO05D010897 2.3e-26 124.8 216 44.0
CARHR018390 Cardamine hirsuta HOM05D009038 ORTHO05D010897 4.9e-24 117.1 284 36.3
A08p30740 Brassica napus HOM05D009038 ORTHO05D010897 2.0e-22 111.7 206 38.8
Sp1g15860 Schrenkiella parvula HOM05D009038 ORTHO05D010897 2.0e-22 111.7 202 39.6
BraA08t35004Z Brassica rapa HOM05D009038 ORTHO05D010897 4.6e-22 110.5 205 39.0
AT2G16575 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 7.8e-22 109.8 184 44.0
Carub.0001s1751 Capsella rubella HOM05D009038 ORTHO05D010897 6.6e-21 106.7 201 41.3
THA.LOC104823260 Tarenaya hassleriana HOM05D009038 ORTHO05D010897 6.6e-21 106.7 417 30.9
C08p18180 Brassica napus HOM05D009038 ORTHO05D010897 1.9e-20 105.1 198 39.4
BolC8t49453H Brassica oleracea HOM05D009038 ORTHO05D010897 1.9e-20 105.1 198 39.4
BcaC07g38888 Brassica carinata HOM05D009038 ORTHO05D010897 4.3e-20 104.0 198 38.9
THA.LOC104812203 Tarenaya hassleriana HOM05D009038 ORTHO05D010897 1.2e-14 85.9 171 36.8
Aa31LG7G2600 Aethionema arabicum HOM05D009038 ORTHO05D010897 1.2e-11 75.9 239 32.2
Thecc.07G105200 Theobroma cacao HOM05D008023 ORTHO05D002944 4.4e-09 67.4 73 56.2
QL08p026875 Quercus lobata HOM05D008023 ORTHO05D002944 1.3e-08 65.9 75 50.7
Duzib213G0674 Durio zibethinus HOM05D008023 ORTHO05D002944 2.2e-08 65.1 334 29.6
MELO3C025631.2 Cucumis melo HOM05D008023 ORTHO05D002944 2.9e-08 64.7 73 52.1
ClCG11G017550 Citrullus lanatus HOM05D008023 ORTHO05D002944 3.7e-08 64.3 73 50.7
CANSAT35G0556 Cannabis sativa HOM05D008023 ORTHO05D010897 1.4e-07 62.4 73 49.3
Cpa.g.sc131.62 Carica papaya HOM05D008023 ORTHO05D002944 1.4e-07 62.4 246 30.9
GSVIVG01014227001 Vitis vinifera HOM05D008023 ORTHO05D002944 1.4e-07 62.4 75 49.3
BcaB07g33996 Brassica carinata HOM05D009038 ORTHO05D010897 1.9e-07 62.0 68 54.4
BcaB07g34003 Brassica carinata HOM05D009038 ORTHO05D010897 2.4e-07 61.6 63 54.0
Cfa019590 Carpinus fangiana HOM05D008023 ORTHO05D002944 3.2e-07 61.2 76 52.6
MD11G1259700 Malus domestica HOM05D008023 ORTHO05D002944 5.4e-07 60.5 73 47.9
Manes.03G103000 Manihot esculenta HOM05D008023 ORTHO05D002944 5.4e-07 60.5 164 34.1
FAN25G1709 Fragaria x ananassa HOM05D008023 ORTHO05D002944 7.1e-07 60.1 73 50.7
Medtr8g463800 Medicago truncatula HOM05D008023 ORTHO05D002944 7.1e-07 60.1 76 47.4
Gohir.D05G344300 Gossypium hirsutum HOM05D008023 ORTHO05D002944 9.2e-07 59.7 73 52.1
Gorai.009G372300 Gossypium raimondii HOM05D008023 ORTHO05D002944 9.2e-07 59.7 73 52.1
Phvul.011G159200 Phaseolus vulgaris HOM05D008023 ORTHO05D002944 9.2e-07 59.7 76 46.1
Prupe.4G170200 Prunus persica HOM05D008023 ORTHO05D002944 9.2e-07 59.7 242 26.9
Ciclev10008068m.g Citrus clementina HOM05D008023 ORTHO05D002944 1.2e-06 59.3 76 47.4
Glyma.06G231200 Glycine max HOM05D008023 ORTHO05D002944 1.2e-06 59.3 434 24.2
Manes.15G092100 Manihot esculenta HOM05D008023 ORTHO05D002944 1.2e-06 59.3 76 48.7
Psat4g175400 Pisum sativum HOM05D008023 ORTHO05D002944 1.2e-06 59.3 80 43.8
RcHm_v2.0_Chr5g0031461 Rosa chinensis HOM05D008023 ORTHO05D002944 1.2e-06 59.3 73 47.9
FAN21G3564 Fragaria x ananassa HOM05D008023 ORTHO05D002944 1.6e-06 58.9 73 49.3
TWI39G0037 Tripterygium wilfordii HOM05D008023 ORTHO05D002944 1.6e-06 58.9 73 47.9
VMungo1127G0722 Vigna mungo HOM05D008023 ORTHO05D002944 1.6e-06 58.9 76 48.7
BcaB07g34000 Brassica carinata HOM05D009038 ORTHO05D010897 2.1e-06 58.5 64 54.7
CsaV3_4G033230 Cucumis sativus L. HOM05D008023 ORTHO05D010897 2.1e-06 58.5 252 29.0
Gohir.A04G038800 Gossypium hirsutum HOM05D008023 ORTHO05D002944 2.1e-06 58.5 73 49.3
Potri.001G376800 Populus trichocarpa HOM05D008023 ORTHO05D002944 2.7e-06 58.2 73 50.7
MD03G1240400 Malus domestica HOM05D008023 ORTHO05D002944 3.5e-06 57.8 73 46.6
FvH4_3g18640 Fragaria vesca HOM05D008023 ORTHO05D002944 6.0e-06 57.0 73 47.9
FAN11G0626 Fragaria x ananassa HOM05D008023 ORTHO05D002944 6.0e-06 57.0 73 47.9
Atru.chr2.2242 Acer truncatum HOM05D008023 ORTHO05D002944 7.8e-06 56.6 416 26.4
Duzib170G0431 Durio zibethinus HOM05D008023 ORTHO05D002944 7.8e-06 56.6 258 29.5
Lj1A833T49 Lonicera japonica HOM05D008023 ORTHO05D002944 7.8e-06 56.6 76 46.1


User provided reference genes

Program Settings