Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 6.5e-57 223.8 110 100.0
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 8.0e-55 216.9 110 95.5
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 2.3e-54 215.3 110 95.5
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 4.5e-50 201.1 110 89.1
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 7.8e-50 200.3 110 89.1
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 2.3e-49 198.7 110 89.1
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 1.2e-45 186.4 111 83.8
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 2.0e-45 185.7 111 82.0
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 7.5e-45 183.7 111 81.1
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 9.8e-45 183.3 111 82.9
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 7.8e-42 173.7 112 80.4
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 5.0e-41 171.0 112 80.4
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 5.0e-41 171.0 112 80.4
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 4.3e-40 167.9 111 75.7
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 8.6e-33 143.7 111 69.4
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 4.9e-20 101.3 109 54.1
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 8.4e-20 100.5 107 52.3
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 1.1e-19 100.1 107 52.3
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 2.4e-19 99.0 107 52.3
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 7.1e-19 97.4 107 51.4
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 4.6e-18 94.7 102 47.1
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 1.0e-17 93.6 111 50.5
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 1.0e-17 93.6 107 49.5
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 1.7e-17 92.8 101 53.5
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 3.9e-17 91.7 107 49.5
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.1e-17 91.3 91 53.8
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 3.3e-16 88.6 106 49.1
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 4.3e-16 88.2 106 48.1
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 9.6e-16 87.0 109 44.0
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 9.6e-16 87.0 109 44.0
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 3.6e-15 85.1 102 54.9
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 4.7e-15 84.7 104 52.9
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 8.1e-15 84.0 103 49.5
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 1.4e-14 83.2 108 50.9
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 3.1e-14 82.0 102 45.1
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 4.0e-14 81.6 101 43.6
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 1.2e-13 80.1 106 49.1
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 1.5e-13 79.7 91 48.4
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 2.0e-13 79.3 101 45.5
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 4.4e-13 78.2 101 44.6
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 4.4e-13 78.2 102 47.1
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 5.8e-13 77.8 102 47.1
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 1.3e-12 76.6 109 43.1
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 2.9e-12 75.5 103 44.7
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 3.8e-12 75.1 102 45.1
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 3.8e-12 75.1 96 45.8
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 6.4e-12 74.3 93 49.5
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 1.9e-11 72.8 106 41.5
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 5.4e-11 71.2 90 44.4
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 7.1e-11 70.9 89 51.7
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 2.7e-10 68.9 92 47.8
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 2.7e-10 68.9 117 41.0
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 3.0e-09 65.5 87 46.0
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 3.9e-09 65.1 102 38.2
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 1.1e-08 63.5 97 38.1
ClCG07G011230 Citrullus lanatus HOM05D008232 ORTHO05D010390 1.5e-08 63.2 92 38.0
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 1.5e-08 63.2 101 34.7
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 1.9e-08 62.8 118 38.1
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 4.3e-08 61.6 102 33.3
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 1.3e-07 60.1 87 40.2
Sc10g0006420 Simmondsia chinensis HOM05D008232 ORTHO05D010390 1.8e-06 56.2 101 40.6
Ciclev10027457m.g Citrus clementina HOM05D008232 ORTHO05D010390 2.4e-06 55.8 65 43.1
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 3.1e-06 55.5 85 38.8
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 9.0e-06 53.9 71 46.5


User provided reference genes

Program Settings