Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.1e-174 615.5 296 100.0
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 3.3e-164 581.6 295 93.6
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.1e-162 576.6 296 93.2
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 3.1e-154 548.5 296 88.9
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 1.6e-153 546.2 297 87.2
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 2.9e-152 542.0 296 87.5
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 1.5e-148 529.6 297 86.5
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 1.5e-148 529.6 297 86.5
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 1.7e-147 526.2 296 85.8
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 2.2e-147 525.8 297 85.5
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 7.0e-146 520.8 299 82.9
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 5.8e-116 421.4 296 69.6
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 2.3e-109 399.4 286 66.1
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 5.2e-109 398.3 275 67.3
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 6.8e-109 397.9 264 68.9
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 4.4e-108 395.2 262 68.3
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 9.2e-106 387.5 290 65.2
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 1.2e-105 387.1 273 65.9
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.0e-104 384.0 269 65.4
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 2.3e-104 382.9 308 59.4
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 5.1e-104 381.7 249 67.9
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.6e-102 376.7 279 63.4
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 3.6e-102 375.6 255 67.1
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.1e-101 374.0 254 66.1
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 5.2e-101 371.7 297 60.3
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 3.4e-100 369.0 251 63.3
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 3.4e-100 369.0 274 62.0
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 9.9e-100 367.5 275 62.2
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 9.9e-100 367.5 249 66.3
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.3e-99 367.1 263 64.6
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.7e-99 366.7 300 59.3
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.7e-99 366.7 249 66.3
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.7e-99 366.7 250 63.6
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 2.9e-99 365.9 249 65.9
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 3.8e-99 365.5 249 66.3
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 6.4e-99 364.8 251 62.9
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.1e-98 364.0 249 65.1
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 1.2e-97 360.5 296 55.4
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 3.5e-97 359.0 250 63.2
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 1.3e-96 357.1 249 63.9
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 1.7e-96 356.7 264 62.5
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.7e-96 356.7 272 59.6
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 3.9e-96 355.5 275 59.6
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 3.9e-96 355.5 247 65.2
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.5e-95 353.6 265 59.6
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 1.9e-95 353.2 278 59.7
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 2.5e-95 352.8 283 56.5
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 2.5e-95 352.8 251 63.3
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 4.3e-95 352.1 262 64.1
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 3.6e-94 349.0 250 61.2
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 4.7e-94 348.6 251 64.9
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.1e-93 347.4 249 62.7
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.4e-93 347.1 268 60.4
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.4e-93 346.3 286 58.4
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 4.0e-93 345.5 286 58.4
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 5.2e-93 345.1 283 59.7
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 5.2e-93 345.1 293 58.0
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 5.2e-93 345.1 286 58.0
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 6.9e-93 344.7 248 64.5
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 4.4e-92 342.0 265 62.6
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 5.8e-92 341.7 291 59.1
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.3e-91 340.5 253 62.5
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.3e-91 340.5 249 60.2
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 4.9e-91 338.6 249 62.2
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 4.9e-91 338.6 317 51.7
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 3.2e-90 335.9 250 61.2
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 2.1e-89 333.2 288 56.6
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 5.1e-88 328.6 259 59.1
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 5.6e-87 325.1 250 58.8
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 7.3e-87 324.7 253 58.9
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 4.8e-86 322.0 318 51.6
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.0e-84 316.6 288 53.5
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 9.9e-84 314.3 232 61.6
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 3.5e-81 305.8 264 58.0
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 3.6e-78 295.8 241 53.9
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.5e-76 288.9 280 53.6
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 2.9e-75 286.2 284 52.8
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 5.5e-74 282.0 279 50.2
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.9e-71 273.5 204 57.8
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.2e-68 264.2 261 50.2
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 6.0e-65 251.9 297 44.1
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 1.3e-64 250.8 202 55.9
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 2.6e-60 236.5 252 50.4
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 2.3e-56 223.4 247 43.7
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 2.8e-54 216.5 104 94.2
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.1e-53 214.5 258 43.4
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 1.0e-48 198.0 255 40.4
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 3.0e-48 196.4 179 50.3
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 5.1e-48 195.7 169 55.6
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 3.7e-46 189.5 141 67.4
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 6.3e-46 188.7 130 61.5
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.1e-41 172.2 246 37.4
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.7e-38 164.1 107 61.7
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-32 144.4 82 69.5
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 4.0e-32 142.9 147 54.4
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 8.5e-27 125.2 79 64.6
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 4.7e-25 119.4 280 28.9
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 5.2e-24 115.9 84 60.7
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 2.4e-21 107.1 68 70.6
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 9.1e-21 105.1 65 66.2
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 4.5e-20 102.8 60 75.0
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-19 100.5 51 78.4
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-19 100.5 51 78.4
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 1.9e-18 97.4 67 70.1
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.3e-14 84.7 66 60.6
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.3e-14 84.7 66 60.6
BcaB04g17422 Brassica carinata HOM05D007092 ORTHO05D008947 1.1e-13 81.6 49 75.5
C03p19630 Brassica napus HOM05D000267 ORTHO05D020178 9.5e-10 68.6 49 65.3
C03p03960 Brassica napus HOM05D000267 ORTHO05D020178 1.6e-09 67.8 49 65.3
BolC3t12933H Brassica oleracea HOM05D000267 ORTHO05D020178 1.6e-09 67.8 49 65.3
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 4.7e-09 66.2 53 50.9
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 4.7e-09 66.2 53 50.9
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.3e-08 63.9 59 47.5
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.5e-07 61.2 47 61.7
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 2.0e-07 60.8 32 78.1
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 7.5e-07 58.9 54 50.0
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 1.3e-06 58.2 46 52.2
SEGI_02665 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 3.7e-06 56.6 83 43.4
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 8.3e-06 55.5 43 48.8
TAR627G0568 Trochodendron aralioides HOM05D000264 ORTHO05D000152 8.3e-06 55.5 60 50.0


User provided reference genes

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