Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 4.7e-146 521.2 261 100.0
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 1.4e-113 413.3 265 81.9
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 7.9e-93 344.4 271 69.7
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 5.1e-92 341.7 274 67.5
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 1.6e-90 336.7 271 66.1
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 6.1e-85 318.2 270 65.6
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 1.0e-84 317.4 279 64.2
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 2.3e-84 316.2 269 65.8
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 8.2e-82 307.8 269 64.3
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 6.5e-79 298.1 265 62.3
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 6.1e-61 238.4 268 52.6
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.3e-55 220.7 201 60.2
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 2.9e-55 219.5 180 68.9
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 4.0e-52 209.1 162 74.7
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 2.2e-42 176.8 291 44.0
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 1.7e-39 167.2 260 41.5
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.5e-38 164.1 293 41.0
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 7.3e-38 161.8 270 38.9
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 9.5e-38 161.4 304 40.8
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.1e-37 160.2 304 40.5
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 5.2e-36 155.6 279 38.0
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 5.2e-36 155.6 277 38.3
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.2e-35 154.5 304 35.5
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 1.2e-35 154.5 273 39.9
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.2e-35 154.5 262 39.7
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 4.4e-35 152.5 283 36.4
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 4.4e-35 152.5 318 37.4
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 5.7e-35 152.1 172 51.2
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 9.8e-35 151.4 216 44.0
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 9.8e-35 151.4 272 39.7
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 9.8e-35 151.4 273 37.4
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 1.7e-34 150.6 261 39.8
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 2.9e-34 149.8 172 51.2
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 6.4e-34 148.7 269 37.2
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 8.3e-34 148.3 168 48.2
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 2.4e-33 146.7 280 36.8
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 4.1e-33 146.0 276 36.6
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 4.1e-33 146.0 267 40.4
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 5.4e-33 145.6 276 36.6
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 5.4e-33 145.6 287 38.7
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 7.0e-33 145.2 174 47.7
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 9.2e-33 144.8 270 39.3
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 2.0e-32 143.7 288 38.2
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 2.7e-32 143.3 152 52.6
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 5.9e-32 142.1 319 31.7
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 7.8e-32 141.7 298 35.6
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 1.5e-30 137.5 260 36.9
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 1.5e-30 137.5 275 34.2
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 5.6e-30 135.6 249 37.8
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 1.2e-29 134.4 211 42.7
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.6e-29 134.0 282 33.3
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 8.0e-29 131.7 179 44.7
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.0e-28 131.3 179 46.4
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.8e-28 130.6 308 33.8
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 2.3e-28 130.2 249 38.2
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 4.0e-28 129.4 285 34.7
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 6.8e-28 128.6 268 34.7
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 1.5e-27 127.5 230 39.6
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 2.0e-27 127.1 298 33.9
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 2.6e-27 126.7 298 34.2
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 3.4e-27 126.3 290 34.1
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 7.5e-27 125.2 295 34.6
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 1.7e-26 124.0 274 33.2
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.2e-26 123.6 280 35.0
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 4.9e-26 122.5 274 34.7
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.1e-25 121.3 260 33.5
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.4e-25 120.9 291 34.4
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 1.9e-25 120.6 110 58.2
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.9e-25 120.6 148 44.6
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 1.2e-24 117.9 233 41.6
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 6.0e-24 115.5 99 57.6
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 6.0e-24 115.5 114 57.9
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 6.0e-24 115.5 305 29.2
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 8.6e-23 111.7 156 45.5
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 4.3e-22 109.4 166 42.8
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 4.3e-22 109.4 157 45.9
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 7.3e-22 108.6 289 30.1
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.6e-21 107.5 132 43.9
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 3.6e-21 106.3 147 43.5
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 4.7e-21 105.9 258 31.8
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 4.7e-21 105.9 158 43.7
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 6.2e-21 105.5 325 29.5
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 8.1e-21 105.1 287 30.7
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.8e-20 104.0 218 38.1
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 5.2e-20 102.4 125 45.6
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 1.2e-19 101.3 263 31.6
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 4.4e-19 99.4 226 35.0
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 4.4e-19 99.4 115 47.8
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 3.7e-18 96.3 159 41.5
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 6.4e-18 95.5 117 47.0
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.4e-17 94.4 320 28.1
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 3.5e-16 89.7 285 28.1
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 6.0e-16 89.0 149 35.6
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 6.0e-16 89.0 98 54.1
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 1.5e-14 84.3 221 33.9
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 7.6e-11 72.0 107 41.1
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.7e-10 70.9 48 66.7
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 8.4e-10 68.6 176 31.8
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 4.1e-09 66.2 46 65.2
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 7.3e-06 55.5 127 34.6


User provided reference genes

Program Settings