Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 8.0e-103 377.1 189 100.0
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 3.0e-94 348.6 188 91.0
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 3.1e-91 338.6 188 89.4
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 3.5e-90 335.1 187 87.7
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 1.0e-89 333.6 188 87.8
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 1.0e-89 333.6 188 87.8
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.3e-89 333.2 199 85.4
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 5.0e-89 331.3 188 86.2
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 1.1e-88 330.1 194 84.5
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 5.5e-88 327.8 186 86.6
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 3.6e-87 325.1 199 82.9
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 4.4e-77 291.6 182 78.0
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.0e-73 280.4 186 72.0
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 9.5e-72 273.9 186 71.5
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 8.9e-70 267.3 185 68.6
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.2e-69 266.9 187 67.4
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 2.6e-69 265.8 188 68.1
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 2.6e-69 265.8 185 69.2
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 2.6e-69 265.8 181 68.5
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 4.4e-69 265.0 186 68.3
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 5.8e-69 264.6 188 68.1
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 5.8e-69 264.6 183 68.9
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 7.5e-69 264.2 181 69.6
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 7.5e-69 264.2 198 64.6
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 9.8e-69 263.8 186 67.2
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.2e-68 262.7 186 67.7
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 4.9e-68 261.5 198 65.2
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 4.9e-68 261.5 189 68.8
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 4.9e-68 261.5 200 64.0
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 6.4e-68 261.2 198 64.1
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 8.3e-68 260.8 181 68.5
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.4e-67 260.0 187 69.5
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.9e-67 259.6 192 67.7
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.9e-67 259.6 186 66.7
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 3.2e-67 258.8 188 66.5
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 3.2e-67 258.8 186 67.2
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 3.2e-67 258.8 186 66.1
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 4.1e-67 258.5 181 68.0
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 5.4e-67 258.1 185 69.7
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 7.0e-67 257.7 186 66.1
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 7.0e-67 257.7 186 66.1
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 7.0e-67 257.7 192 65.1
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 9.2e-67 257.3 183 68.3
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.2e-66 256.9 186 67.7
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.6e-66 256.5 188 67.0
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 2.0e-66 256.1 189 68.8
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.0e-66 256.1 189 67.2
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 2.0e-66 256.1 181 67.4
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 2.7e-66 255.8 187 66.8
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 2.7e-66 255.8 194 64.9
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 3.5e-66 255.4 187 65.2
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 4.6e-66 255.0 188 67.6
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 6.0e-66 254.6 189 68.3
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 6.0e-66 254.6 186 67.2
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 1.0e-65 253.8 188 67.6
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.3e-65 253.4 188 67.0
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 3.0e-65 252.3 191 64.4
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 3.0e-65 252.3 188 65.4
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.9e-65 251.9 187 67.9
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 3.9e-65 251.9 186 66.7
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.0e-65 251.5 187 67.9
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 5.0e-65 251.5 188 67.6
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 5.0e-65 251.5 192 63.5
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 6.6e-65 251.1 187 67.9
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 2.5e-64 249.2 181 67.4
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.5e-64 249.2 192 68.8
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.5e-64 249.2 192 68.8
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.3e-64 248.8 185 67.0
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 3.3e-64 248.8 180 68.3
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 5.6e-64 248.1 186 65.6
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 2.1e-63 246.1 187 64.7
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 4.7e-63 245.0 180 63.3
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 6.2e-63 244.6 187 67.4
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 1.4e-62 243.4 184 60.9
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 1.4e-62 243.4 180 66.7
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.8e-62 243.0 186 62.9
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.1e-62 242.3 183 67.2
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 4.0e-62 241.9 186 62.9
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 5.2e-62 241.5 186 64.0
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.2e-61 240.4 183 65.0
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 7.5e-61 237.7 180 63.3
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.3e-60 236.9 174 67.2
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.9e-60 235.7 216 60.6
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 3.7e-60 235.3 188 64.9
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 6.4e-60 234.6 202 63.9
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.4e-59 233.4 183 62.8
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.1e-58 229.6 186 61.3
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.6e-55 218.8 155 69.7
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.1e-54 217.2 152 68.4
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 8.9e-54 214.2 258 46.5
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 2.0e-53 213.0 181 61.3
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 4.4e-53 211.8 134 75.4
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 3.2e-51 205.7 183 55.2
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 4.1e-51 205.3 177 57.1
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 7.8e-50 201.1 155 63.9
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.0e-49 200.7 152 62.5
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 1.3e-49 200.3 157 64.3
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 2.3e-49 199.5 161 63.4
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 4.3e-48 195.3 152 63.8
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 9.5e-48 194.1 158 64.6
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 2.4e-46 189.5 185 51.4
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 5.8e-45 184.9 156 58.3
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.1e-43 180.6 165 57.6
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 2.7e-42 176.0 186 50.5
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 6.6e-41 171.4 137 59.1
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 4.3e-40 168.7 191 50.8
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.6e-37 159.5 183 50.3
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.0e-33 147.5 132 60.6
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.3e-33 146.4 182 44.5
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.7e-28 130.2 182 43.4
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 2.4e-27 126.3 181 40.9
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 5.4e-27 125.2 182 39.6
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 3.3e-24 115.9 70 78.6
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 2.1e-18 96.7 58 77.6
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 3.1e-06 56.2 91 44.0


User provided reference genes

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