Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 6.4e-83 310.8 172 100.0
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 7.6e-60 234.2 178 77.5
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 1.1e-58 230.3 180 77.8
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 2.4e-58 229.2 181 78.5
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 3.2e-58 228.8 176 77.3
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 2.1e-57 226.1 178 77.5
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 4.9e-51 204.9 172 72.1
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 4.9e-51 204.9 172 72.1
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.4e-50 203.4 172 71.5
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 4.3e-47 191.8 176 67.6
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 9.6e-47 190.7 172 69.8
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 9.6e-47 190.7 172 69.8
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 2.1e-41 172.9 172 61.0
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 3.0e-32 142.5 154 60.4
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 8.7e-32 141.0 110 70.9
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.9e-31 139.8 110 70.9
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.9e-31 139.8 110 70.9
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.9e-31 139.8 113 71.7
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.9e-31 139.8 156 59.0
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 1.6e-30 136.7 187 52.4
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 2.2e-30 136.3 174 53.4
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 4.8e-30 135.2 178 52.8
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 6.3e-30 134.8 151 57.0
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 8.2e-30 134.4 87 81.6
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.1e-29 134.0 113 67.3
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 1.4e-29 133.7 154 57.8
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.8e-29 133.3 178 51.7
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.8e-29 133.3 155 56.8
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.4e-29 132.9 104 69.2
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 3.1e-29 132.5 87 80.5
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 6.9e-29 131.3 166 56.0
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 9.0e-29 131.0 150 57.3
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 9.0e-29 131.0 172 54.7
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 9.0e-29 131.0 172 54.1
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 9.0e-29 131.0 133 58.6
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 2.0e-28 129.8 170 54.1
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.0e-28 129.8 93 75.3
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 3.4e-28 129.0 172 51.7
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 3.4e-28 129.0 172 50.6
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 4.5e-28 128.6 131 61.8
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 4.5e-28 128.6 120 64.2
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 4.5e-28 128.6 170 52.4
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 4.5e-28 128.6 177 52.0
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 5.9e-28 128.3 86 79.1
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 5.9e-28 128.3 180 51.7
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 7.6e-28 127.9 168 52.4
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 7.6e-28 127.9 178 51.1
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 7.6e-28 127.9 100 72.0
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 7.6e-28 127.9 170 50.6
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.3e-27 127.1 127 62.2
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.3e-27 127.1 172 53.5
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.7e-27 126.7 86 75.6
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 2.2e-27 126.3 86 80.2
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 2.2e-27 126.3 165 51.5
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 2.2e-27 126.3 149 54.4
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 2.9e-27 125.9 164 50.0
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 5.0e-27 125.2 102 65.7
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 6.5e-27 124.8 171 49.7
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 6.5e-27 124.8 174 51.1
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 6.5e-27 124.8 147 57.1
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 6.5e-27 124.8 87 75.9
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 8.5e-27 124.4 133 58.6
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.1e-26 124.0 99 68.7
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.4e-26 123.6 87 74.7
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 2.5e-26 122.9 144 54.9
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 2.5e-26 122.9 118 61.0
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 3.2e-26 122.5 148 54.1
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 4.2e-26 122.1 174 51.1
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 4.2e-26 122.1 168 51.8
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 5.5e-26 121.7 147 53.7
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 5.5e-26 121.7 128 55.5
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.2e-25 120.6 148 53.4
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.2e-25 120.6 176 51.7
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.2e-25 120.6 176 51.7
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 1.2e-25 120.6 89 74.2
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.2e-25 120.6 89 74.2
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.2e-25 120.6 87 75.9
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.2e-25 120.6 131 56.5
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.6e-25 120.2 86 73.3
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.6e-25 120.2 102 68.6
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.1e-25 119.8 89 74.2
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.1e-25 119.8 89 74.2
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.1e-25 119.8 172 49.4
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 3.6e-25 119.0 175 48.6
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.6e-25 119.0 180 48.9
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 4.6e-25 118.6 89 73.0
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 6.1e-25 118.2 106 62.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 6.1e-25 118.2 91 68.1
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 6.1e-25 118.2 91 68.1
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 7.9e-25 117.9 86 73.3
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.3e-24 117.1 86 69.8
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.8e-24 116.7 172 50.0
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.8e-24 116.7 167 49.7
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.3e-24 116.3 165 50.3
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.0e-24 115.9 174 50.0
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.9e-24 115.5 175 49.1
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 5.1e-24 115.2 105 62.9
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 6.7e-24 114.8 148 51.4
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 6.7e-24 114.8 151 52.3
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 6.7e-24 114.8 180 47.2
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.9e-23 113.2 163 51.5
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 2.2e-22 109.8 170 47.1
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.1e-21 105.9 82 67.1
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 4.1e-21 105.5 147 53.1
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 4.1e-21 105.5 85 62.4
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 6.9e-21 104.8 143 46.9
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 5.9e-20 101.7 83 63.9
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 7.7e-20 101.3 89 64.0
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 3.2e-18 95.9 159 44.0
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 7.2e-18 94.7 89 59.6
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 2.1e-17 93.2 65 75.4
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 6.1e-17 91.7 138 43.5
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 9.7e-15 84.3 87 55.2
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.7e-14 83.6 87 54.0
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.4e-13 80.5 80 51.2
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 3.8e-11 72.4 86 48.8
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 6.1e-09 65.1 49 67.3


User provided reference genes

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