Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G30940 Arabidopsis lyrata HOM05D021309 ORTHO05D000101 2.7e-32 141.4 69 100.0
AL2G30960 Arabidopsis lyrata HOM05D021309 ORTHO05D000101 2.1e-24 115.2 66 84.8
AL239U10020 Arabidopsis lyrata HOM05D021309 ORTHO05D080349 4.0e-20 100.9 68 77.9
AL2G30970 Arabidopsis lyrata HOM05D021309 ORTHO05D079878 4.0e-20 100.9 68 77.9
AL2G30980 Arabidopsis lyrata HOM05D021309 ORTHO05D000101 2.7e-16 88.2 68 70.6
AL2G29700 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-11 71.2 55 63.6
Carub.0002s1709 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-10 67.8 55 56.4
AT1G70960 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.4e-10 67.0 49 61.2
Carub.0002s1401 Capsella rubella HOM05D000171 ORTHO05D000101 3.2e-09 64.7 49 57.1
AT1G70380 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.1e-09 63.5 54 55.6
Carub.0002s1707 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-08 62.0 48 58.3
Carub.0002s1816 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-08 62.0 55 60.0
CARHR064250 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.6e-08 60.8 63 47.6
AL2G30490 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.9e-08 60.1 55 58.2
Sp3g03160 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.3e-07 59.3 55 52.7
AT1G70390 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.3e-07 58.5 55 58.2
THA.LOC104800494 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 5.1e-07 57.4 62 48.4
Ca_24912_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 8.7e-07 56.6 51 51.0
Ca_24932_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 8.7e-07 56.6 51 51.0
Carub.0002s1708 Capsella rubella HOM05D021309 ORTHO05D114526 1.1e-06 56.2 49 59.2
BcaC01g05919 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-06 55.8 48 54.2
A03p18030 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-06 55.8 48 54.2
C03p21080 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-06 55.8 48 54.2
BolC3t14490H Brassica oleracea HOM05D000171 ORTHO05D000101 1.5e-06 55.8 48 54.2
BraA03t11064Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-06 55.8 48 54.2
Carub.0002s1400 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-06 55.8 53 52.8
Carub.0002s1408 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-06 55.8 53 52.8
AT5G52610 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.5e-06 55.1 47 55.3
C02p22650 Brassica napus HOM05D000171 ORTHO05D000101 2.5e-06 55.1 52 46.2
Carub.0003s2509 Capsella rubella HOM05D000171 ORTHO05D000101 2.5e-06 55.1 55 52.7
AL1G31740 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.3e-06 54.7 47 57.4
C03p23010 Brassica napus HOM05D000171 ORTHO05D000101 3.3e-06 54.7 46 54.3
BolC3t14702H Brassica oleracea HOM05D000171 ORTHO05D000101 3.3e-06 54.7 46 54.3
CARHR019760 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.3e-06 54.7 44 59.1
Aqoxy5G00679 Aquilegia oxysepala HOM05D000171 ORTHO05D000101 5.6e-06 53.9 44 56.8
BcaB01g03998 Brassica carinata HOM05D000171 ORTHO05D000101 5.6e-06 53.9 48 52.1
BcaB08g35087 Brassica carinata HOM05D000171 ORTHO05D000101 5.6e-06 53.9 47 53.2
A02p14050 Brassica napus HOM05D000171 ORTHO05D000101 5.6e-06 53.9 52 44.2
BraA02t06466Z Brassica rapa HOM05D000171 ORTHO05D000101 5.6e-06 53.9 52 44.2
BraA10t45106Z Brassica rapa HOM05D000171 ORTHO05D000101 5.6e-06 53.9 42 54.8
A02p14060 Brassica napus HOM05D000171 ORTHO05D000101 7.4e-06 53.5 46 47.8
BraA02t06469Z Brassica rapa HOM05D000171 ORTHO05D000101 7.4e-06 53.5 46 47.8
COL.COLO4_13966 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.4e-06 53.5 49 51.0
Thhalv10022230m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.4e-06 53.5 54 46.3
A04p24850 Brassica napus HOM05D000171 ORTHO05D000101 9.6e-06 53.1 45 51.1
Thhalv10022123m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.6e-06 53.1 52 48.1


User provided reference genes

Program Settings