Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G30400 Arabidopsis lyrata HOM05D010624 ORTHO05D012738 7.9e-51 203.4 95 100.0
AT1G70895 Arabidopsis thaliana HOM05D010624 ORTHO05D012738 2.9e-37 158.3 100 81.0
CARHR064170 Cardamine hirsuta HOM05D010624 ORTHO05D012738 1.3e-29 132.9 99 69.7
Thhalv10019376m.g Eutrema salsugineum HOM05D010624 ORTHO05D012738 8.0e-27 123.6 99 68.7
BcaC03g15246 Brassica carinata HOM05D010624 ORTHO05D012738 9.7e-25 116.7 96 65.6
C02p28360 Brassica napus HOM05D010624 ORTHO05D012738 9.7e-25 116.7 96 65.6
BolC2t08880H Brassica oleracea HOM05D010624 ORTHO05D012738 9.7e-25 116.7 96 65.6
Sp5g26060 Schrenkiella parvula HOM05D010624 ORTHO05D012738 1.3e-24 116.3 97 66.0
BcaB05g24620 Brassica carinata HOM05D010624 ORTHO05D012738 8.2e-24 113.6 97 68.0
A07p37310 Brassica napus HOM05D010624 ORTHO05D012738 1.3e-21 106.3 97 62.9
BraA07t31291Z Brassica rapa HOM05D010624 ORTHO05D012738 1.3e-21 106.3 97 62.9
Carub.0002s1768 Capsella rubella HOM05D010624 ORTHO05D012738 1.9e-20 102.4 109 61.5
BcaB03g15571 Brassica carinata HOM05D010624 ORTHO05D012738 4.7e-19 97.8 97 57.7
BcaB03g15578 Brassica carinata HOM05D010624 ORTHO05D012738 4.7e-19 97.8 97 57.7
BcaB03g15585 Brassica carinata HOM05D010624 ORTHO05D012738 1.4e-18 96.3 97 57.7
BolC6t39557H Brassica oleracea HOM05D010624 ORTHO05D012738 6.8e-18 94.0 97 55.7
BcaB03g14852 Brassica carinata HOM05D010624 ORTHO05D012738 8.8e-18 93.6 97 57.7
BcaC08g46538 Brassica carinata HOM05D010624 ORTHO05D012738 5.7e-17 90.9 97 54.6
C06p44990 Brassica napus HOM05D010624 ORTHO05D012738 5.7e-17 90.9 97 54.6
Thecc.02G283700 Theobroma cacao HOM05D009151 ORTHO05D009939 4.7e-11 71.2 92 44.6
Gohir.A03G120200 Gossypium hirsutum HOM05D009151 ORTHO05D009939 8.3e-08 60.5 97 42.3
Haze_10978 Corylus avellana HOM05D009151 ORTHO05D009939 1.1e-07 60.1 92 42.4
Gohir.D02G143366 Gossypium hirsutum HOM05D009151 ORTHO05D009939 1.8e-07 59.3 91 44.0
Cfa008627 Carpinus fangiana HOM05D009151 ORTHO05D009939 2.4e-07 58.9 86 43.0
Manes.15G129400 Manihot esculenta HOM05D009151 ORTHO05D009939 5.4e-07 57.8 99 37.4
Aa31LG4G10160 Aethionema arabicum HOM05D010624 ORTHO05D012738 1.2e-06 56.6 38 68.4
Manes.17G078600 Manihot esculenta HOM05D009151 ORTHO05D009939 2.7e-06 55.5 98 35.7
A06p44390 Brassica napus HOM05D009799 ORTHO05D009939 3.5e-06 55.1 101 37.6
BcaC06g31297 Brassica carinata HOM05D009799 ORTHO05D009939 4.5e-06 54.7 105 37.1
BcaC06g34159 Brassica carinata HOM05D009799 ORTHO05D009939 7.8e-06 53.9 105 39.0
BraA09t37943Z Brassica rapa HOM05D009799 ORTHO05D009939 7.8e-06 53.9 104 39.4
CiPaw.05G195900 Carya illinoinensis HOM05D009151 ORTHO05D009939 7.8e-06 53.9 90 38.9


User provided reference genes

Program Settings