Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G29930 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 1.5e-84 316.2 168 100.0
AT1G70540 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 9.6e-84 313.5 168 98.8
Carub.0002s1726 Capsella rubella HOM05D008070 ORTHO05D001888 3.0e-77 292.0 169 94.7
Sp5g25690 Schrenkiella parvula HOM05D008070 ORTHO05D001888 3.8e-72 275.0 168 88.1
CARHR063750 Cardamine hirsuta HOM05D008070 ORTHO05D001888 4.9e-72 274.6 168 88.7
Thhalv10019249m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 3.7e-67 258.5 168 85.7
BcaC03g15202 Brassica carinata HOM05D008070 ORTHO05D001888 4.8e-67 258.1 168 82.1
A02p16620 Brassica napus HOM05D008070 ORTHO05D001888 4.8e-67 258.1 168 82.1
C02p27870 Brassica napus HOM05D008070 ORTHO05D001888 4.8e-67 258.1 168 82.1
BolC2t08833H Brassica oleracea HOM05D008070 ORTHO05D001888 4.8e-67 258.1 168 82.1
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 4.8e-67 258.1 168 82.1
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 9.7e-44 180.6 168 58.3
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 8.2e-43 177.6 162 60.5
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 3.1e-42 175.6 170 58.2
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 1.6e-41 173.3 158 59.5
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 1.6e-41 173.3 172 58.1
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 5.9e-41 171.4 168 57.1
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 5.9e-41 171.4 168 57.1
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 1.3e-40 170.2 167 56.3
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 1.7e-40 169.9 172 58.1
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 6.5e-40 167.9 167 56.3
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 9.4e-39 164.1 134 61.9
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 8.0e-38 161.0 166 54.8
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 1.0e-37 160.6 166 54.8
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 1.0e-37 160.6 166 54.8
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 1.4e-37 160.2 169 55.0
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 1.4e-37 160.2 169 55.0
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 1.4e-37 160.2 169 55.0
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 8.8e-37 157.5 166 53.6
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 8.8e-37 157.5 166 53.6
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 2.0e-36 156.4 166 54.2
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 9.7e-36 154.1 155 54.8
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 3.1e-34 149.1 160 52.5
BcaB05g24587 Brassica carinata HOM05D008070 ORTHO05D001888 5.3e-34 148.3 124 67.7
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 4.5e-33 145.2 167 53.3
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 1.8e-29 133.3 136 54.4
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 4.0e-29 132.1 136 54.4
Aa31LG4G10410 Aethionema arabicum HOM05D008070 ORTHO05D001888 1.4e-26 123.6 165 46.7
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 3.2e-23 112.5 137 44.5
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 4.4e-20 102.1 153 38.6
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 9.8e-20 100.9 164 38.4
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 2.8e-19 99.4 163 38.0
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 4.9e-19 98.6 134 42.5
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 9.2e-18 94.4 167 35.9
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.2e-17 94.0 160 37.5
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 1.6e-17 93.6 159 37.7
A07p13910 Brassica napus HOM05D001342 ORTHO05D001286 1.3e-16 90.5 109 48.6
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 2.3e-16 89.7 133 38.3
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 2.3e-16 89.7 137 37.2
C07p20460 Brassica napus HOM05D001342 ORTHO05D001286 3.8e-16 89.0 109 47.7
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 1.5e-15 87.0 160 40.6
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 1.5e-15 87.0 160 40.6
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 1.5e-15 87.0 131 36.6
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 1.9e-15 86.7 155 37.4
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 1.2e-14 84.0 162 37.7
Sed0024894 Sechium edule HOM05D008070 ORTHO05D001888 2.1e-14 83.2 136 39.0
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 2.8e-14 82.8 157 35.0
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 6.8e-13 78.2 164 35.4
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 6.8e-13 78.2 161 31.1
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.2e-12 77.4 140 35.0
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 1.5e-12 77.0 163 36.2
MELO3C011973.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.5e-12 77.0 168 34.5
Sed0022116 Sechium edule HOM05D008070 ORTHO05D001888 2.6e-12 76.3 137 34.3
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 5.7e-12 75.1 151 32.5
Eucgr.H02532 Eucalyptus grandis HOM05D008070 ORTHO05D001888 9.8e-12 74.3 156 34.0
Cpa.g.sc69.89 Carica papaya HOM05D008070 ORTHO05D001888 1.3e-11 73.9 160 34.4
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 1.7e-11 73.6 168 33.9
ATR1152G035 Amborella trichopoda HOM05D008070 ORTHO05D001888 2.2e-11 73.2 177 33.3
Sed0000802 Sechium edule HOM05D008070 ORTHO05D001888 2.2e-11 73.2 137 35.0
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 2.9e-11 72.8 159 30.8
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 6.4e-11 71.6 134 34.3
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 1.4e-10 70.5 147 34.0
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 1.8e-10 70.1 76 43.4
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 1.8e-10 70.1 76 43.4
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 2.4e-10 69.7 174 32.8
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 4.1e-10 68.9 157 30.6
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 9.2e-10 67.8 76 42.1
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 9.2e-10 67.8 76 42.1
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.2e-09 67.4 135 35.6
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 2.0e-09 66.6 132 33.3
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 2.0e-09 66.6 133 32.3
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 2.7e-09 66.2 132 32.6
MBI19_g03227_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 2.7e-09 66.2 145 33.8
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 4.6e-09 65.5 158 31.0
Rhsim02G0004500 Rhododendron simsii HOM05D005742 ORTHO05D001888 4.6e-09 65.5 141 30.5
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 5.9e-09 65.1 133 35.3
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 7.8e-09 64.7 142 33.8
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 7.8e-09 64.7 159 30.2
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 3.0e-08 62.8 132 34.1
QL04p082804 Quercus lobata HOM05D010056 ORTHO05D001888 3.0e-08 62.8 163 30.1
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 3.9e-08 62.4 134 34.3
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 3.9e-08 62.4 134 32.8
HPP92_027565 Vanilla planifolia HOM05D005742 ORTHO05D001888 5.0e-08 62.0 137 31.4
Duzib248G0935 Durio zibethinus HOM05D008070 ORTHO05D001888 6.6e-08 61.6 162 34.6
HPP92_017245 Vanilla planifolia HOM05D005742 ORTHO05D001888 6.6e-08 61.6 137 31.4
Cfa015324 Carpinus fangiana HOM05D005742 ORTHO05D001888 8.6e-08 61.2 137 32.1
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 8.6e-08 61.2 139 31.7
Prupe.1G249100 Prunus persica HOM05D008070 ORTHO05D001888 8.6e-08 61.2 153 30.7
CDE02G2547 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 1.5e-07 60.5 145 29.0
QL12p019526 Quercus lobata HOM05D005742 ORTHO05D001888 1.9e-07 60.1 79 41.8
CDE06G2294 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 4.3e-07 58.9 145 29.0
DCAR_027000 Daucus carota HOM05D005742 ORTHO05D001888 7.3e-07 58.2 149 32.2
PSO478G3987 Papaver somniferum HOM05D020914 ORTHO05D001888 9.5e-07 57.8 169 27.2
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 1.2e-06 57.4 133 31.6
DCAR_026529 Daucus carota HOM05D009745 ORTHO05D011350 1.2e-06 57.4 173 30.6
Oeu012697.1 Olea europaea HOM05D009745 ORTHO05D011350 2.1e-06 56.6 160 28.1
PSO017G3787 Papaver somniferum HOM05D020914 ORTHO05D023578 2.8e-06 56.2 169 26.6
Sed0009222 Sechium edule HOM05D005742 ORTHO05D001888 2.8e-06 56.2 143 27.3
Lalb_Chr15g0089211 Lupinus albus HOM05D005742 ORTHO05D001888 3.6e-06 55.8 110 32.7
Lalb_Chr15g0089221 Lupinus albus HOM05D005742 ORTHO05D001888 3.6e-06 55.8 110 32.7
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 4.7e-06 55.5 144 29.9
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 8.0e-06 54.7 163 27.6


User provided reference genes

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