Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.1e-53 211.5 103 100.0
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.8e-28 127.1 70 85.7
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 8.1e-25 117.1 70 77.1
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.2e-22 109.0 70 74.3
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 2.9e-22 108.6 68 76.5
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 2.9e-22 108.6 68 76.5
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 3.8e-22 108.2 71 71.8
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 3.8e-22 108.2 71 71.8
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-22 107.8 73 71.2
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 8.4e-22 107.1 68 75.0
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-21 105.5 63 76.2
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 7.1e-21 104.0 68 73.5
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 7.1e-21 104.0 68 73.5
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 6.6e-19 97.4 70 61.4
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.5e-18 95.5 69 58.0
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 3.3e-18 95.1 71 71.8
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-16 89.7 68 55.9
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 1.4e-16 89.7 68 55.9
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 3.1e-16 88.6 82 50.0
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 3.1e-16 88.6 82 50.0
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 4.0e-16 88.2 84 48.8
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 4.0e-16 88.2 84 48.8
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 4.0e-16 88.2 84 48.8
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.3e-16 87.8 70 54.3
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-15 86.7 66 56.1
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-15 86.7 68 52.9
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-15 86.7 68 54.4
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-15 86.7 68 54.4
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 1.2e-15 86.7 66 56.1
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.2e-15 86.7 69 63.8
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-14 83.2 66 54.5
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-14 83.2 66 54.5
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 1.3e-14 83.2 66 54.5
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 2.2e-14 82.4 66 54.5
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-13 79.0 64 53.1
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-13 79.0 73 54.8
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 2.4e-13 79.0 64 53.1
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 3.2e-13 78.6 87 43.7
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.2e-13 78.2 68 51.5
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-12 76.6 64 51.6
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 2.7e-12 75.5 66 50.0
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.5e-12 75.1 65 55.4
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 4.6e-12 74.7 69 46.4
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 6.0e-12 74.3 64 51.6
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.7e-11 72.8 64 48.4
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.0e-11 72.0 59 55.9
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.6e-10 67.8 61 50.8
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.6e-10 67.8 57 49.1
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 7.3e-10 67.4 51 56.9
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 1.6e-09 66.2 69 46.4
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.1e-09 65.9 68 47.1
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-09 65.5 64 43.8
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 8.1e-09 63.9 63 46.0
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-08 63.2 69 44.9
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-08 63.2 69 44.9
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.8e-08 62.8 61 49.2
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.4e-08 62.4 70 42.9
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-08 62.4 64 42.2
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.1e-08 62.0 58 43.1
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 3.1e-08 62.0 69 43.5
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 4.0e-08 61.6 56 46.4
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 6.9e-08 60.8 69 44.9
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 5.8e-07 57.8 69 46.4
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.8e-07 57.8 49 49.0
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 9.9e-07 57.0 69 46.4
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 9.9e-07 57.0 69 46.4
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 9.9e-07 57.0 69 46.4
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 4.9e-06 54.7 69 44.9
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 8.4e-06 53.9 65 40.0


User provided reference genes

Program Settings