Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.5e-195 686.0 344 100.0
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.0e-85 318.2 379 49.3
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.0e-52 209.5 116 87.9
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 4.7e-45 186.0 117 75.2
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 8.9e-44 181.8 118 74.6
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-43 181.0 118 75.4
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 2.6e-43 180.3 118 72.9
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 2.6e-43 180.3 118 72.9
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-42 177.9 118 74.6
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 1.3e-42 177.9 118 74.6
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 1.7e-42 177.6 118 72.9
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 1.7e-42 177.6 118 72.9
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.2e-42 177.2 118 73.7
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 2.9e-42 176.8 118 72.9
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 3.7e-42 176.4 118 72.0
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 4.9e-42 176.0 118 72.0
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 8.4e-42 175.3 118 72.9
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 8.4e-42 175.3 118 72.0
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 7.8e-40 168.7 122 64.8
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 7.8e-40 168.7 122 64.8
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-39 167.5 122 63.9
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-39 167.5 122 63.9
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 6.6e-39 165.6 110 72.7
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-37 160.2 115 67.0
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 2.8e-37 160.2 115 66.1
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 2.8e-37 160.2 115 67.0
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 2.8e-37 160.2 115 66.1
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.1e-36 158.3 115 64.3
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 8.9e-36 155.2 136 54.4
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 1.9e-33 147.5 115 61.7
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 5.4e-33 146.0 135 60.0
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 2.1e-32 144.1 119 62.2
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 2.1e-32 144.1 119 62.2
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 7.8e-32 142.1 96 72.9
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 7.8e-32 142.1 115 63.5
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 1.7e-31 141.0 119 60.5
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 3.0e-31 140.2 117 60.7
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 3.0e-31 140.2 117 60.7
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.9e-31 139.8 118 57.6
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 8.7e-31 138.7 117 59.8
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 1.1e-30 138.3 117 59.8
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 5.6e-30 136.0 132 50.0
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 9.6e-30 135.2 117 59.0
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.4e-28 131.3 135 48.9
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 4.0e-28 129.8 96 70.8
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.2e-27 128.3 126 51.6
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 2.6e-27 127.1 115 53.9
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 5.8e-27 125.9 115 56.5
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 9.9e-27 125.2 83 74.7
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 3.8e-26 123.2 121 53.7
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.4e-26 122.1 136 49.3
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.4e-25 121.3 126 49.2
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 1.9e-25 120.9 118 55.1
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 1.9e-25 120.9 140 47.1
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.2e-25 119.8 127 49.6
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 6.0e-24 115.9 115 51.3
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 1.3e-23 114.8 118 47.5
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.7e-23 114.4 71 73.2
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 3.0e-23 113.6 101 59.4
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 7.4e-22 109.0 87 64.4
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.1e-20 105.1 133 44.4
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 2.4e-20 104.0 116 44.8
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 3.1e-20 103.6 124 44.4
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 3.1e-20 103.6 124 44.4
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 2.9e-18 97.1 83 56.6
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 4.9e-18 96.3 115 52.2
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-17 94.7 115 44.3
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 7.1e-17 92.4 106 44.3
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 7.9e-16 89.0 69 69.6
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-15 88.6 224 29.0
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.3e-15 88.2 69 65.2
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-13 81.6 108 40.7
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.7e-10 71.2 59 55.9
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.2e-10 70.9 74 48.6
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 8.4e-10 68.9 74 48.6
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 8.7e-07 58.9 47 51.1
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 1.1e-06 58.5 49 53.1


User provided reference genes

Program Settings