Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 2.5e-245 851.7 431 100.0
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 3.4e-242 841.3 431 98.1
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 4.0e-235 817.8 431 96.1
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 2.1e-231 805.4 431 94.4
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.1e-227 793.1 431 93.3
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.0e-227 791.2 428 93.7
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 3.8e-225 784.6 431 92.6
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.4e-224 782.7 431 92.3
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 1.4e-224 782.7 431 92.3
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.1e-221 773.1 431 91.4
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.6e-220 769.2 433 91.2
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 4.5e-218 761.1 431 90.5
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.7e-215 751.9 426 88.7
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 4.2e-208 728.0 425 85.4
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.4e-203 712.2 427 83.8
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 6.9e-203 710.7 427 83.4
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 1.2e-202 709.9 432 83.3
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 2.5e-200 702.2 432 81.5
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 4.2e-200 701.4 430 83.5
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.8e-198 696.0 432 82.2
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 3.9e-198 694.9 433 82.0
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 3.9e-198 694.9 433 82.0
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.5e-197 693.0 442 79.0
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 5.7e-197 691.0 433 82.2
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.3e-196 689.9 437 81.2
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.7e-196 689.5 433 81.3
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 2.2e-196 689.1 433 81.5
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 6.3e-196 687.6 424 83.0
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 6.3e-196 687.6 428 80.8
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 6.3e-196 687.6 437 80.5
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 2.4e-195 685.6 433 80.6
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 1.2e-194 683.3 435 81.1
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 2.0e-194 682.6 429 80.4
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 3.4e-194 681.8 380 88.7
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 5.0e-193 677.9 434 80.0
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 5.0e-193 677.9 430 80.0
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 5.5e-192 674.5 429 80.0
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 1.2e-191 673.3 421 81.0
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 7.9e-191 670.6 437 79.6
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 5.1e-190 667.9 370 89.7
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 6.7e-190 667.5 430 80.7
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 1.5e-189 666.4 420 81.2
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 3.3e-189 665.2 434 78.1
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 5.7e-189 664.5 384 87.0
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 2.2e-188 662.5 428 77.6
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 2.8e-188 662.1 419 80.9
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 3.7e-188 661.8 412 81.1
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 6.3e-188 661.0 456 75.7
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 1.4e-187 659.8 412 82.0
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.4e-187 659.8 435 78.9
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 2.6e-186 655.6 405 82.2
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 3.5e-186 655.2 429 79.7
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 5.9e-186 654.4 432 78.5
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 7.7e-186 654.1 416 81.7
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 7.7e-186 654.1 430 79.1
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.0e-185 653.7 425 78.1
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.3e-185 653.3 397 83.6
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.3e-185 653.3 410 81.2
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 1.7e-185 652.9 441 78.0
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 2.2e-185 652.5 439 75.9
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 2.9e-185 652.1 432 78.5
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 2.9e-185 652.1 415 81.4
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 3.8e-185 651.7 435 77.0
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 6.5e-185 651.0 435 77.2
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 8.5e-185 650.6 401 82.8
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 1.4e-184 649.8 430 78.4
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 2.5e-184 649.0 425 78.6
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 2.5e-184 649.0 431 77.3
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 5.5e-184 647.9 415 78.6
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 1.6e-183 646.4 403 81.6
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.6e-183 646.4 432 78.0
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 3.6e-183 645.2 434 77.9
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 3.9e-182 641.7 386 84.5
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 1.5e-181 639.8 418 79.4
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 2.0e-181 639.4 365 87.1
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 2.6e-181 639.0 433 76.9
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 4.8e-180 634.8 433 76.7
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.4e-179 633.3 397 82.6
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.2e-178 630.2 415 78.1
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.3e-177 626.7 433 76.4
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 1.3e-177 626.7 343 89.5
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 1.7e-177 626.3 412 78.9
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 1.7e-177 626.3 415 78.3
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.9e-177 625.5 416 78.1
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 6.5e-177 624.4 435 75.2
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 8.5e-177 624.0 434 75.1
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 2.5e-176 622.5 431 75.9
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.1e-175 617.8 416 77.4
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.0e-174 617.1 416 77.2
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 4.0e-174 615.1 414 77.1
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 4.0e-174 615.1 414 77.1
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 2.6e-173 612.5 402 78.1
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 2.6e-173 612.5 416 76.7
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 5.7e-173 611.3 364 84.3
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 9.7e-173 610.5 388 79.9
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 2.2e-172 609.4 328 90.5
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.8e-172 609.0 433 73.2
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 1.1e-171 607.1 384 80.7
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 1.9e-168 596.3 412 75.2
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 2.5e-168 595.9 410 73.7
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 3.2e-168 595.5 421 72.0
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 2.1e-167 592.8 401 78.3
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 6.1e-167 591.3 402 73.1
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 1.3e-164 583.6 435 73.6
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 1.7e-164 583.2 435 73.1
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 2.8e-164 582.4 369 77.5
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 1.8e-163 579.7 399 73.2
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 4.5e-162 575.1 369 76.7
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.0e-161 573.9 430 70.5
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.0e-161 573.9 314 87.9
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 1.7e-161 573.2 360 77.8
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 4.0e-158 562.0 384 77.1
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.8e-155 553.1 417 68.6
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 6.1e-151 538.1 350 77.1
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.4e-147 526.9 428 65.4
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.0e-146 523.1 371 75.5
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 2.7e-146 522.7 423 65.5
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 1.0e-145 520.8 283 90.1
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 3.0e-145 519.2 428 65.4
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 5.0e-145 518.5 434 63.6
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 8.6e-145 517.7 375 70.1
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 4.0e-142 508.8 425 64.0
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 4.4e-141 505.4 428 63.3
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 5.4e-139 498.4 427 62.5
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 9.2e-139 497.7 426 62.9
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 9.2e-139 497.7 426 62.9
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.7e-138 496.1 443 60.7
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 6.6e-137 491.5 307 81.4
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 8.6e-137 491.1 428 62.4
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 4.3e-136 488.8 428 62.1
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 8.3e-132 474.6 268 86.9
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 6.8e-126 454.9 441 57.8
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.4e-123 447.2 380 60.5
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 3.0e-121 439.5 350 61.1
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 1.1e-120 437.6 314 70.4
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.1e-115 421.0 352 66.2
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 2.7e-114 416.4 312 66.7
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.6e-113 411.8 282 73.4
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 4.8e-111 405.6 302 70.5
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 3.2e-107 392.9 224 87.5
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 3.4e-85 319.7 224 71.4
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.3e-79 298.9 234 69.7
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 9.7e-72 275.0 196 71.9
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 5.0e-68 262.7 201 65.2
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 6.5e-68 262.3 290 53.8
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 8.2e-63 245.4 180 68.9
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 1.8e-62 244.2 276 49.3
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 7.7e-61 238.8 180 67.8
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 4.0e-57 226.5 149 71.1
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 1.7e-52 211.1 176 61.9
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 8.5e-52 208.8 170 64.1
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 8.0e-50 202.2 311 38.9
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 9.8e-48 195.3 101 91.1
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.1e-46 191.8 148 70.9
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-46 191.4 176 59.1
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 9.1e-46 188.7 101 88.1
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 3.3e-43 180.3 100 88.0
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 7.2e-43 179.1 104 83.7
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 1.6e-42 177.9 169 58.6
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 1.4e-41 174.9 100 84.0
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 6.6e-36 156.0 76 94.7
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 2.1e-34 151.0 122 66.4
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 2.8e-34 150.6 77 88.3
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 8.0e-34 149.1 212 39.2
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.0e-33 148.7 135 61.5
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 8.9e-33 145.6 90 84.4
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 8.6e-28 129.0 72 88.9
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 8.9e-25 119.0 74 81.1
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 2.4e-22 110.9 180 42.2
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 2.5e-19 100.9 106 54.7
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 8.4e-15 85.9 49 87.8
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 1.9e-11 74.7 141 36.9
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 1.9e-11 74.7 141 36.9
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.5e-11 74.3 53 66.0
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.8e-09 68.2 36 91.7
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 5.2e-09 66.6 59 61.0
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea HOM05D003910 ORTHO05D004622 4.9e-07 60.1 62 58.1


User provided reference genes

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