Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G28370 Arabidopsis lyrata HOM05D011628 ORTHO05D014769 1.4e-177 626.3 350 100.0
AT1G69280 Arabidopsis thaliana HOM05D011628 ORTHO05D014769 1.3e-146 523.5 322 92.5
Carub.0002s1587 Capsella rubella HOM05D011628 ORTHO05D014769 6.5e-135 484.6 323 86.7
Thhalv10018555m.g Eutrema salsugineum HOM05D011628 ORTHO05D014769 5.6e-126 454.9 327 80.7
A07p35610 Brassica napus HOM05D011628 ORTHO05D014769 3.0e-87 326.2 332 66.6
BraA07t31149Z Brassica rapa HOM05D011628 ORTHO05D014769 3.0e-87 326.2 332 66.6
BcaC08g46379 Brassica carinata HOM05D011628 ORTHO05D014769 2.1e-85 320.1 326 66.6
C06p40620 Brassica napus HOM05D011628 ORTHO05D014769 2.1e-85 320.1 326 66.6
BolC6t39369H Brassica oleracea HOM05D011628 ORTHO05D014769 2.1e-85 320.1 326 66.6
BcaB03g15887 Brassica carinata HOM05D011628 ORTHO05D014769 8.1e-85 318.2 327 65.7
Aa31LG4G11640 Aethionema arabicum HOM05D011628 ORTHO05D014769 4.8e-69 265.8 346 56.4
THA.LOC104822009 Tarenaya hassleriana HOM05D011628 ORTHO05D014769 1.8e-20 104.4 293 33.4
THA.LOC104800368 Tarenaya hassleriana HOM05D011628 ORTHO05D014769 2.4e-20 104.0 338 34.3
COL.COLO4_27878 Corchorus olitorius HOM05D003787 ORTHO05D001736 1.8e-12 77.8 211 31.3
Duzib268G1106 Durio zibethinus HOM05D003787 ORTHO05D001736 7.0e-12 75.9 264 29.9
PGR119G1736 Punica granatum HOM05D003787 ORTHO05D001736 1.6e-11 74.7 294 28.9
Cpa.g.sc1.128 Carica papaya HOM05D003787 ORTHO05D001736 1.0e-10 72.0 238 32.8
QL03p074082 Quercus lobata HOM05D003787 ORTHO05D001736 3.9e-10 70.1 230 29.1
Duzib251G0768 Durio zibethinus HOM05D003787 ORTHO05D001736 5.0e-10 69.7 306 26.8
Potri.010G158000 Populus trichocarpa HOM05D003787 ORTHO05D001736 5.0e-10 69.7 222 31.1
Sabra10G0120000 Salix brachista HOM05D003787 ORTHO05D001736 7.3e-09 65.9 214 31.8
MD13G1062500 Malus domestica HOM05D003787 ORTHO05D001736 9.5e-09 65.5 170 36.5
Potri.008G096300 Populus trichocarpa HOM05D003787 ORTHO05D001736 2.1e-08 64.3 228 29.4
BcaC08g46377 Brassica carinata HOM05D011628 ORTHO05D032022 3.6e-08 63.5 96 51.0
MELO3C012154.2 Cucumis melo HOM05D003787 ORTHO05D001736 6.1e-08 62.8 297 30.0
Atru.chr11.1622 Acer truncatum HOM05D003787 ORTHO05D001736 8.0e-08 62.4 225 31.6
C06p40640 Brassica napus HOM05D000085 ORTHO05D032022 1.0e-07 62.0 68 61.8
BolC6t39367H Brassica oleracea HOM05D000085 ORTHO05D032022 1.0e-07 62.0 68 61.8
CsaV3_5G033340 Cucumis sativus L. HOM05D003787 ORTHO05D001736 1.0e-07 62.0 214 30.8
TWI79G0236 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 2.3e-07 60.8 282 28.7
CiPaw.05G124800 Carya illinoinensis HOM05D003787 ORTHO05D001736 6.8e-07 59.3 273 28.6
ClCG05G023700 Citrullus lanatus HOM05D003787 ORTHO05D001736 8.9e-07 58.9 180 32.2
Sabra08G0072600 Salix brachista HOM05D003787 ORTHO05D001736 8.9e-07 58.9 228 27.6
BcaB07g30663 Brassica carinata HOM05D003787 ORTHO05D001736 2.0e-06 57.8 142 32.4
Dinv16736 Davidia involucrata HOM05D003787 ORTHO05D001736 2.6e-06 57.4 154 31.2
A09p24510 Brassica napus HOM05D003787 ORTHO05D001736 4.4e-06 56.6 145 33.1
Thecc.02G330000 Theobroma cacao HOM05D003787 ORTHO05D001736 4.4e-06 56.6 240 26.7
BraA09t38045Z Brassica rapa HOM05D003787 ORTHO05D001736 5.8e-06 56.2 145 33.1
Nitab4.5_0007460g0020 Nicotiana tabacum HOM05D011975 ORTHO05D001736 5.8e-06 56.2 242 28.5
GSVIVG01012223001 Vitis vinifera HOM05D003787 ORTHO05D001736 5.8e-06 56.2 175 33.1
MD16G1060800 Malus domestica HOM05D003787 ORTHO05D001736 7.5e-06 55.8 240 29.6
Nitab4.5_0001118g0030 Nicotiana tabacum HOM05D011975 ORTHO05D001736 7.5e-06 55.8 225 28.4


User provided reference genes

Program Settings