Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G26320 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-53 212.6 100 100.0
Carub.0002s1403 Capsella rubella HOM05D000171 ORTHO05D000101 3.2e-18 95.1 96 52.1
Carub.0002s1400 Capsella rubella HOM05D000171 ORTHO05D000101 2.7e-17 92.0 96 50.0
AL2G30510 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.7e-16 87.4 69 63.8
Carub.0002s1408 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-15 86.3 97 47.4
AL2G29710 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 6.2e-14 80.9 69 58.0
AL2G29730 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 6.2e-14 80.9 69 58.0
AT1G71290 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.1e-13 78.6 67 56.7
CARHR064250 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.1e-13 78.6 74 51.4
AL2G29700 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-12 75.9 64 57.8
AT1G70970 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.6e-12 73.9 67 53.7
AT1G70960 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.0e-11 73.6 69 58.0
Carub.0002s1401 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-11 73.2 70 52.9
AT1G70380 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.8e-11 71.6 84 45.2
Carub.0002s1709 Capsella rubella HOM05D000171 ORTHO05D000101 7.1e-10 67.4 103 42.7
Carub.0002s1816 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-09 66.6 69 49.3
Sp3g03160 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.2e-09 66.6 90 43.3
AT1G70390 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.5e-09 65.1 76 47.4
Carub.0004s0656 Capsella rubella HOM05D000171 ORTHO05D000101 1.0e-08 63.5 66 50.0
Carub.0002s1774 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-08 63.2 61 54.1
Carub.0003s2509 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-08 63.2 66 47.0
Carub.0004s0661 Capsella rubella HOM05D000171 ORTHO05D000101 2.3e-08 62.4 66 50.0
A02p40260 Brassica napus HOM05D000171 ORTHO05D033637 3.9e-08 61.6 70 45.7
AL7G22270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.7e-07 57.8 93 36.6
Thhalv10019615m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.4e-07 57.4 78 41.0
A02p40250 Brassica napus HOM05D000171 ORTHO05D033637 1.6e-06 56.2 70 42.9
BraA02t08992Z Brassica rapa HOM05D000171 ORTHO05D000101 1.6e-06 56.2 70 42.9
AT1G76830 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.1e-06 55.8 71 43.7
Carub.0002s1707 Capsella rubella HOM05D000171 ORTHO05D000101 2.8e-06 55.5 76 46.1
AL2G30490 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.7e-06 55.1 70 45.7
AL6G22490 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.8e-06 54.7 79 41.8
AL6G22480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.2e-06 54.3 77 41.6
Thhalv10012180m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.2e-06 54.3 88 34.1
Carub.0001s3671 Capsella rubella HOM05D000171 ORTHO05D000101 8.2e-06 53.9 63 38.1
Carub.0196s0001 Capsella rubella HOM05D000171 ORTHO05D000101 8.2e-06 53.9 63 38.1


User provided reference genes

Program Settings