Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.0e-235 819.7 410 100.0
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 6.8e-208 727.2 412 91.7
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 3.9e-195 684.9 409 85.3
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.1e-176 623.6 410 80.2
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.5e-167 593.2 394 78.9
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 9.3e-165 583.9 416 76.0
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.8e-163 579.7 421 74.8
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 2.1e-161 572.8 414 75.8
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 9.0e-160 567.4 422 73.5
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 2.6e-159 565.8 421 73.4
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 2.6e-159 565.8 421 73.4
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.1e-144 515.4 311 83.0
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 5.3e-136 488.4 410 64.6
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.5e-135 485.3 444 62.6
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 1.3e-134 483.8 418 64.4
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.2e-134 483.0 411 63.0
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 2.9e-134 482.6 426 62.2
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 5.0e-134 481.9 434 62.2
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 4.2e-133 478.8 413 64.6
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 7.2e-133 478.0 430 62.1
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.2e-132 477.2 415 63.1
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 4.4e-130 468.8 431 60.1
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 7.4e-130 468.0 429 59.9
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 9.7e-130 467.6 429 60.1
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 6.3e-129 464.9 429 59.9
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 1.0e-126 457.6 408 60.3
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 1.0e-126 457.6 408 60.3
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.5e-125 453.8 399 62.7
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.8e-104 383.6 378 55.6
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 2.4e-104 383.3 322 61.8
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 7.0e-104 381.7 362 56.1
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 9.1e-104 381.3 401 52.9
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.6e-103 380.6 417 50.6
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.0e-103 380.2 439 49.0
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 3.5e-103 379.4 366 54.9
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 7.7e-103 378.3 429 50.1
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 1.0e-102 377.9 436 49.5
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.3e-102 377.5 445 50.6
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.3e-102 376.7 417 49.6
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.9e-102 376.3 402 52.7
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 2.9e-102 376.3 435 49.7
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 5.0e-102 375.6 421 50.6
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 2.5e-101 373.2 410 50.2
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.6e-100 370.5 428 49.3
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 2.8e-100 369.8 460 48.0
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.4e-99 367.5 383 53.8
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.5e-98 364.0 399 51.1
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.5e-98 364.0 374 52.7
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 4.4e-98 362.5 329 55.9
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 9.8e-98 361.3 424 50.9
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.3e-97 360.9 401 51.1
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.3e-97 360.9 388 52.3
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 2.9e-97 359.8 433 48.3
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 3.7e-97 359.4 304 59.2
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 6.3e-97 358.6 369 53.4
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 6.3e-97 358.6 424 49.3
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 1.4e-96 357.5 295 62.4
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.2e-95 354.4 367 53.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 2.0e-95 353.6 417 49.2
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 2.0e-95 353.6 358 52.8
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 4.6e-95 352.4 324 55.2
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 5.9e-95 352.1 292 60.3
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 5.9e-95 352.1 417 49.9
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 1.7e-94 350.5 326 55.5
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 1.7e-94 350.5 329 56.8
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 2.3e-94 350.1 426 49.1
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 3.9e-94 349.4 316 56.6
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 3.9e-94 349.4 381 50.9
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 3.9e-94 349.4 301 59.8
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 8.6e-94 348.2 452 46.2
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.1e-93 347.8 373 50.9
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.5e-93 347.4 302 59.9
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 5.6e-93 345.5 415 49.4
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 1.2e-92 344.4 351 53.3
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.2e-92 344.4 336 54.8
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 1.6e-92 344.0 362 52.5
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 2.1e-92 343.6 419 47.5
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 2.1e-92 343.6 295 58.0
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 3.6e-92 342.8 428 46.0
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 6.2e-92 342.0 428 45.6
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 8.0e-92 341.7 430 48.4
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 8.0e-92 341.7 430 48.4
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 8.0e-92 341.7 419 46.1
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.8e-91 340.5 398 48.2
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 2.3e-91 340.1 321 56.7
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 2.3e-91 340.1 422 48.1
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.3e-91 340.1 430 47.4
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.3e-91 340.1 363 54.3
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.1e-91 339.7 307 58.0
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 4.0e-91 339.3 365 51.5
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 8.9e-91 338.2 311 57.6
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.5e-90 337.4 391 49.1
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.0e-90 337.0 417 48.2
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 2.0e-90 337.0 366 51.1
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 2.0e-90 337.0 385 49.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 3.4e-90 336.3 365 50.7
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 3.4e-90 336.3 352 52.6
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.7e-89 334.0 399 49.6
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.9e-89 333.2 494 41.3
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 1.9e-88 330.5 396 49.0
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.1e-88 329.3 367 50.7
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.6e-85 318.9 349 50.4
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 5.6e-85 318.9 368 47.3
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 9.5e-85 318.2 359 48.7
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 8.1e-84 315.1 315 52.7
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 2.3e-83 313.5 418 45.7
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 4.0e-83 312.8 286 56.3
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 8.9e-83 311.6 422 43.8
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.4e-82 309.7 360 48.6
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 4.4e-82 309.3 369 46.6
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 2.2e-81 307.0 434 43.5
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 2.2e-81 307.0 457 44.2
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 3.7e-81 306.2 337 49.0
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 8.3e-81 305.1 442 43.0
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.1e-80 304.7 354 47.2
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.2e-79 301.2 267 57.7
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.3e-77 292.7 323 50.5
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 3.4e-74 283.1 389 42.2
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 3.4e-74 283.1 320 48.4
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 3.7e-73 279.6 322 47.5
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 3.2e-72 276.6 352 45.7
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.6e-71 274.2 362 43.6
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.9e-70 269.6 294 49.0
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 5.6e-69 265.8 212 62.7
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.4e-67 260.4 298 46.6
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 2.2e-65 253.8 415 40.2
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 1.9e-61 240.7 288 47.9
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.5e-61 240.4 271 49.4
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.3e-59 232.6 265 48.3
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 7.9e-55 218.8 366 39.9
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.0e-54 218.4 183 62.8
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 6.6e-54 215.7 277 46.6
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 6.6e-54 215.7 366 40.2
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 7.3e-53 212.2 176 62.5
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 4.9e-49 199.5 192 54.2
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 4.6e-47 193.0 166 59.0
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.1e-43 180.3 366 37.4
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 2.2e-41 174.1 378 34.9
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 5.1e-30 136.3 371 32.1
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.5e-26 124.8 200 38.0
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 2.6e-26 124.0 217 37.3
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.4e-24 118.2 343 30.0
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.6e-23 114.8 304 30.9
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 2.2e-20 104.4 121 50.4
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 6.3e-20 102.8 85 62.4
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 6.5e-17 92.8 122 39.3
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 1.9e-16 91.3 144 43.8
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 2.2e-09 67.8 65 60.0
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 1.6e-07 61.6 94 39.4
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.7e-07 60.8 149 32.9


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