Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 0.0e+00 4196.4 2226 100.0
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 0.0e+00 3862.0 2232 92.5
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 0.0e+00 3832.7 2234 90.5
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 0.0e+00 3674.4 2248 87.4
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 0.0e+00 3670.9 2340 84.6
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 0.0e+00 3635.9 2238 86.9
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 0.0e+00 3632.4 2238 86.8
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 0.0e+00 3630.9 2240 86.8
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 0.0e+00 3627.4 2239 86.6
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 0.0e+00 3443.3 2192 83.5
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 0.0e+00 3059.6 2223 73.5
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 0.0e+00 2575.4 2233 62.7
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 0.0e+00 2555.8 2153 63.7
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 0.0e+00 2551.9 2198 62.7
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 0.0e+00 2546.2 2280 60.8
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 0.0e+00 2540.0 2133 64.0
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 0.0e+00 2532.7 2241 61.9
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 0.0e+00 2525.4 2093 64.1
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 0.0e+00 2522.3 2146 63.0
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 0.0e+00 2520.3 2134 64.0
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 0.0e+00 2513.0 2174 62.2
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 0.0e+00 2494.2 2147 63.2
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 0.0e+00 2476.8 2128 63.2
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 0.0e+00 2474.1 2144 63.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 0.0e+00 2473.7 2135 63.4
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 0.0e+00 2468.7 2144 63.2
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 0.0e+00 2464.5 2099 63.1
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 0.0e+00 2447.9 2169 61.3
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 0.0e+00 2427.9 2082 62.7
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 0.0e+00 2425.2 1897 67.5
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 0.0e+00 2419.8 2207 60.4
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 0.0e+00 2372.0 2260 58.0
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 0.0e+00 2367.4 2144 60.3
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 0.0e+00 2362.8 2201 60.3
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 0.0e+00 2360.1 2128 60.0
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 0.0e+00 2358.2 2140 60.0
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 0.0e+00 2346.2 2242 58.5
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 0.0e+00 2327.7 2135 59.2
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 0.0e+00 2322.7 2139 59.3
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 0.0e+00 2320.8 2142 59.1
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 0.0e+00 2316.2 2145 58.9
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 0.0e+00 2315.4 2112 60.7
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 0.0e+00 2311.2 1995 60.9
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 0.0e+00 2308.5 2234 57.4
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 0.0e+00 2301.2 2065 60.0
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 0.0e+00 2295.4 2093 59.5
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 0.0e+00 2273.4 2220 56.3
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 0.0e+00 2272.3 2080 59.7
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 0.0e+00 2250.3 2093 58.5
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 0.0e+00 2250.3 2093 58.5
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 0.0e+00 2248.4 2061 59.7
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 0.0e+00 2247.6 2258 56.5
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 0.0e+00 2236.5 2133 57.3
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 0.0e+00 2231.1 2201 57.7
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 0.0e+00 2230.3 2101 58.8
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 0.0e+00 2226.1 2254 56.2
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 0.0e+00 2215.7 2523 52.4
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 0.0e+00 2203.7 2167 56.2
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 0.0e+00 2202.9 1632 69.9
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 0.0e+00 2152.5 2206 54.7
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 0.0e+00 2150.6 2101 57.4
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 0.0e+00 2127.1 2222 55.4
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 0.0e+00 2122.8 2307 53.7
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 0.0e+00 2121.3 2098 57.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 0.0e+00 2105.5 2180 55.1
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 0.0e+00 2090.5 2126 55.1
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 0.0e+00 2064.3 1449 73.2
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 0.0e+00 2051.6 2016 56.8
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 0.0e+00 2005.7 1986 55.9
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 0.0e+00 1976.4 1941 56.9
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 0.0e+00 1972.6 2255 52.0
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 0.0e+00 1936.8 2189 52.8
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 0.0e+00 1897.9 3070 41.2
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 0.0e+00 1832.0 2063 50.3
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 0.0e+00 1789.6 2138 49.7
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 0.0e+00 1707.2 1738 55.9
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 0.0e+00 1661.7 1985 48.7
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 0.0e+00 1630.5 1673 55.2
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 0.0e+00 1592.0 1609 54.4
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 0.0e+00 1577.4 1773 51.3
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 0.0e+00 1576.2 1129 72.1
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 0.0e+00 1515.7 2033 44.1
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 0.0e+00 1477.6 833 92.4
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 0.0e+00 1404.8 2154 40.9
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 0.0e+00 1362.1 1088 71.7
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 0.0e+00 1330.1 1347 54.0
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 0.0e+00 1293.5 2001 40.8
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 0.0e+00 1253.0 2010 39.9
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 0.0e+00 1176.0 1575 45.1
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 0.0e+00 1167.9 918 66.3
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 0.0e+00 1166.0 1506 44.7
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 0.0e+00 1108.6 1030 58.2
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 0.0e+00 1085.9 2201 35.2
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 0.0e+00 1078.9 1451 46.2
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 3.0e-281 973.4 1050 53.7
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 5.6e-272 942.6 834 59.6
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 8.4e-236 822.4 1278 41.9
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 9.6e-232 808.9 1016 47.4
Cpa.g.sc179.5 Carica papaya HOM05D003845 ORTHO05D004161 3.5e-205 720.7 877 48.7
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 7.7e-205 719.5 935 45.8
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 7.0e-198 696.4 723 54.2
DCAR_017205 Daucus carota HOM05D003845 ORTHO05D004161 3.5e-197 694.1 837 49.3
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 2.7e-181 641.3 578 59.5
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.8e-177 628.6 442 74.4
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 8.6e-172 609.8 475 66.9
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 1.6e-162 578.9 386 74.6
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 8.9e-153 546.6 432 67.8
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 7.1e-150 537.0 373 72.7
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 2.6e-128 465.3 403 60.0
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 1.4e-113 416.4 811 36.9
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 7.4e-107 394.0 290 69.7
FAN09G0938 Fragaria x ananassa HOM05D003845 ORTHO05D004161 2.4e-105 389.0 264 75.0
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 1.3e-98 366.7 362 58.6
SEGI_32880 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 2.3e-92 345.9 878 32.0
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 6.7e-92 344.4 1498 26.4
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 2.8e-90 339.0 290 59.3
Glyma.08G364200 Glycine max HOM05D003845 ORTHO05D004161 5.3e-89 334.7 557 39.3
RcHm_v2.0_Chr2g0163391 Rosa chinensis HOM05D003845 ORTHO05D004161 2.7e-77 295.8 287 58.5
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 2.3e-76 292.7 1779 23.0
CARHR059590 Cardamine hirsuta HOM05D003845 ORTHO05D004161 1.6e-72 280.0 292 71.9
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 4.4e-67 261.9 427 41.7
COL.COLO4_05467 Corchorus olitorius HOM05D003845 ORTHO05D004161 2.7e-64 252.7 591 32.8
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 3.5e-64 252.3 312 49.7
CAN.G625.3 Capsicum annuum HOM05D003845 ORTHO05D004161 1.0e-63 250.8 160 78.8
CSS0040864 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 7.8e-56 224.6 150 74.7
CSS0008855 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.9e-54 219.9 168 69.6
Lsat_1_v5_gn_3_65920 Lactuca sativa HOM05D003845 ORTHO05D004161 1.1e-49 204.1 180 64.4
Lsat_1_v5_gn_4_179241 Lactuca sativa HOM05D003845 ORTHO05D004161 1.1e-49 204.1 180 64.4
Lsat_1_v5_gn_5_95120 Lactuca sativa HOM05D000020 ORTHO05D000543 1.1e-49 204.1 180 64.4
Lsat_1_v5_gn_8_43240 Lactuca sativa HOM05D003845 ORTHO05D004161 1.1e-49 204.1 180 64.4
CiPaw.04G041000 Carya illinoinensis HOM05D003845 ORTHO05D004161 3.5e-48 199.1 324 42.9
Ca_04078_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 3.5e-48 199.1 157 66.9
QL02p051676 Quercus lobata HOM05D003845 ORTHO05D004161 8.6e-47 194.5 125 80.0
Actinidia15875 Actinidia chinensis HOM05D003845 ORTHO05D004161 4.9e-42 178.7 122 73.8
Lsat_1_v5_gn_5_70501 Lactuca sativa HOM05D003845 ORTHO05D004161 9.5e-38 164.5 129 69.0
Cpa.g.sc179.6 Carica papaya HOM05D003845 ORTHO05D004161 1.4e-36 160.6 139 64.0
Lj6g0007936 Lotus japonicus HOM05D003845 ORTHO05D004161 3.5e-32 146.0 470 30.2
Cfa024622 Carpinus fangiana HOM05D003845 ORTHO05D004161 3.0e-31 142.9 623 24.2
CDE02G2490 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 3.3e-30 139.4 222 38.7
Actinidia15877 Actinidia chinensis HOM05D003845 ORTHO05D004161 2.8e-29 136.3 212 39.2
Lsat_1_v5_gn_8_163720 Lactuca sativa HOM05D003845 ORTHO05D004161 6.4e-26 125.2 116 62.1
Gorai.001G080600 Gossypium raimondii HOM05D003845 ORTHO05D004161 3.9e-23 115.9 177 45.2
CSS0031203 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 2.5e-22 113.2 70 78.6
MCO14G535 Micromonas commoda HOM05D003845 ORTHO05D004161 4.0e-20 105.9 489 27.2
Cpa.g.sc3785.2 Carica papaya HOM05D003845 ORTHO05D004161 1.5e-19 104.0 75 72.0
RcHm_v2.0_Chr2g0166401 Rosa chinensis HOM05D003845 ORTHO05D004161 4.5e-19 102.4 146 41.8
Manes.07G074028 Manihot esculenta HOM05D003845 ORTHO05D004161 7.6e-19 101.7 76 68.4
Dinv33934 Davidia involucrata HOM05D003845 ORTHO05D004161 2.2e-18 100.1 220 42.7
Cpa.g.c36099 Carica papaya HOM05D003845 ORTHO05D004161 3.8e-18 99.4 75 70.7
CAN.G178.11 Capsicum annuum HOM05D007284 ORTHO05D009303 7.9e-16 91.7 142 46.5
Actinidia20850 Actinidia chinensis HOM05D003845 ORTHO05D004161 8.7e-15 88.2 100 54.0
COL.COLO4_16180 Corchorus olitorius HOM05D003845 ORTHO05D004161 1.1e-14 87.8 53 77.4
CSS0027472 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.9e-14 87.0 53 77.4
Lsat_1_v5_gn_5_158740 Lactuca sativa HOM05D000727 ORTHO05D000541 3.3e-14 86.3 158 32.9
Cpa.g.sc179.7 Carica papaya HOM05D003845 ORTHO05D004161 5.6e-14 85.5 56 80.4
Actinidia20836 Actinidia chinensis HOM05D004442 ORTHO05D002066 2.8e-13 83.2 70 62.9
Lsat_1_v5_gn_8_150280 Lactuca sativa HOM05D001675 ORTHO05D004161 2.8e-13 83.2 61 59.0
EL10Ac8g19727 Beta vulgaris HOM05D003845 ORTHO05D004161 8.1e-13 81.6 53 81.1
Os06g0505100 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 8.1e-13 81.6 107 38.3
Actinidia17348 Actinidia chinensis HOM05D003226 ORTHO05D015784 1.1e-12 81.3 56 69.6
Actinidia17345 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.4e-12 80.9 54 72.2
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea HOM05D003845 ORTHO05D004161 1.8e-12 80.5 56 69.6
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea HOM05D003845 ORTHO05D004161 2.4e-12 80.1 53 73.6
Actinidia13420 Actinidia chinensis HOM05D003845 ORTHO05D004161 3.1e-12 79.7 62 64.5
RcHm_v2.0_Chr2g0123031 Rosa chinensis HOM05D003845 ORTHO05D004161 1.2e-11 77.8 67 59.7
Hund04285 Selenicereus undatus HOM05D003845 ORTHO05D004161 2.6e-11 76.6 66 59.1
Pp3c9_4980 Physcomitrium patens HOM05D003845 ORTHO05D004161 2.9e-10 73.2 115 39.1
RcHm_v2.0_Chr2g0166391 Rosa chinensis HOM05D003845 ORTHO05D004161 4.9e-10 72.4 71 54.9
EL10Ac9g21747 Beta vulgaris HOM05D000802 ORTHO05D001074 4.2e-09 69.3 44 84.1
CSS0006962 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.2e-09 69.3 42 78.6
Actinidia15876 Actinidia chinensis HOM05D003845 ORTHO05D004161 4.6e-08 65.9 59 47.5
ClCG11G005420 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.0e-07 63.2 50 62.0
arahy.Tifrunner.gnm1.ann1.MNN8Y6 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.1e-06 61.2 37 78.4
TPR.G40067 Trifolium pratense HOM05D003845 ORTHO05D004161 1.1e-06 61.2 51 64.7


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