Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 6.5e-50 200.3 92 100.0
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.0e-43 178.7 92 90.2
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.3e-42 176.0 91 89.0
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.1e-41 172.9 85 90.6
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.6e-40 169.1 90 83.3
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 7.9e-40 166.8 90 82.2
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.8e-39 165.6 87 82.8
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 2.3e-39 165.2 87 83.9
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 3.0e-39 164.9 87 83.9
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 3.0e-39 164.9 87 83.9
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 5.7e-38 160.6 87 81.6
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 5.3e-36 154.1 85 80.0
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-35 152.9 87 79.3
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-35 152.9 87 79.3
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 1.2e-35 152.9 87 79.3
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 1.9e-33 145.6 92 72.8
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.3e-31 138.7 90 65.6
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-30 136.3 90 67.8
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 3.3e-30 134.8 89 68.5
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-30 134.8 89 68.5
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-30 134.8 92 69.6
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 3.3e-30 134.8 89 68.5
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 5.7e-30 134.0 88 69.3
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 1.7e-29 132.5 92 68.5
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.2e-29 132.1 91 63.7
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 3.7e-29 131.3 90 67.8
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 4.8e-29 131.0 92 67.4
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 4.8e-29 131.0 90 64.4
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 8.2e-29 130.2 91 67.0
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.4e-28 129.4 91 63.7
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 3.1e-28 128.3 87 67.8
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 5.3e-28 127.5 82 68.3
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 7.0e-28 127.1 92 63.0
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.2e-27 126.3 93 62.4
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-27 126.3 83 66.3
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 2.7e-27 125.2 93 65.6
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 4.5e-27 124.4 93 62.4
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 4.5e-27 124.4 87 63.2
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 4.5e-27 124.4 93 62.4
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 4.5e-27 124.4 87 63.2
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 4.5e-27 124.4 93 62.4
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 4.5e-27 124.4 87 63.2
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 5.9e-27 124.0 92 62.0
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 5.9e-27 124.0 92 62.0
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.0e-26 123.2 89 64.0
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 1.0e-26 123.2 89 67.4
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 1.0e-26 123.2 89 67.4
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.0e-26 123.2 91 61.5
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.8e-26 121.3 89 61.8
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.8e-26 121.3 90 63.3
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.0e-26 120.9 94 61.7
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.0e-26 120.9 89 61.8
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 5.0e-26 120.9 89 66.3
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 5.0e-26 120.9 88 61.4
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 6.5e-26 120.6 85 64.7
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 8.5e-26 120.2 65 75.4
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 8.5e-26 120.2 89 62.9
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.1e-25 119.8 89 62.9
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 1.1e-25 119.8 89 66.3
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.5e-25 119.4 66 71.2
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-25 119.4 67 73.1
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.9e-25 119.0 90 61.1
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 1.9e-25 119.0 87 62.1
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-25 119.0 90 56.7
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 2.5e-25 118.6 92 62.0
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 2.5e-25 118.6 65 73.8
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.5e-25 118.6 95 58.9
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 5.5e-25 117.5 88 62.5
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 7.2e-25 117.1 94 63.8
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 6.1e-24 114.0 91 61.5
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 8.0e-24 113.6 71 63.4
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.0e-23 111.7 87 60.9
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 1.5e-22 109.4 90 53.3
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.3e-21 104.0 93 50.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 8.3e-21 103.6 68 69.1
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.4e-20 102.8 65 63.1
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.6e-19 99.4 96 50.0
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 7.7e-19 97.1 86 54.7
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 1.3e-18 96.3 87 52.9
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 5.0e-18 94.4 75 61.3
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 8.5e-18 93.6 86 52.3
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 1.9e-17 92.4 87 56.3
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 1.9e-17 92.4 86 53.5
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 1.9e-17 92.4 85 51.8
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 2.5e-17 92.0 87 54.0
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 2.5e-17 92.0 87 55.2
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 2.5e-17 92.0 87 55.2
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 3.2e-17 91.7 87 54.0
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 3.2e-17 91.7 87 54.0
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 3.2e-17 91.7 88 53.4
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 7.2e-17 90.5 87 46.0
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 9.5e-17 90.1 87 49.4
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 2.8e-16 88.6 85 54.1
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.3e-15 85.5 87 46.0
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.8e-15 84.0 92 44.6
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 7.5e-14 80.5 93 44.1
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 9.8e-14 80.1 83 47.0
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 2.2e-13 79.0 94 42.6
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 8.3e-13 77.0 83 45.8
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 1.6e-11 72.8 92 47.8
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 1.6e-11 72.8 92 47.8
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 4.5e-11 71.2 92 46.7
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 4.5e-11 71.2 88 43.2
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 1.0e-10 70.1 92 45.7
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 1.9e-09 65.9 95 45.3
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 7.3e-09 63.9 86 38.4


User provided reference genes

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