Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G24350 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 2.2e-124 449.1 249 100.0
AL3G40740 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 7.8e-74 281.2 219 74.9
Carub.0003s2535 Capsella rubella HOM05D001567 ORTHO05D001409 2.6e-69 266.2 228 71.1
AL2G22880 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 2.1e-63 246.5 136 99.3
A07p07320 Brassica napus HOM05D001567 ORTHO05D001409 3.1e-62 242.7 229 65.1
BraA07t28521Z Brassica rapa HOM05D001567 ORTHO05D001409 3.1e-62 242.7 229 65.1
Sp3g22610 Schrenkiella parvula HOM05D001567 ORTHO05D001409 5.3e-62 241.9 239 61.9
SpUN0027_0090 Schrenkiella parvula HOM05D001567 ORTHO05D001409 5.3e-62 241.9 239 61.9
BolC7t41581H Brassica oleracea HOM05D001567 ORTHO05D001409 9.0e-62 241.1 229 64.6
CARHR101310 Cardamine hirsuta HOM05D001567 ORTHO05D001409 2.0e-61 240.0 238 65.1
BcaC06g35767 Brassica carinata HOM05D001567 ORTHO05D001409 3.2e-59 232.6 220 64.1
BcaB06g26705 Brassica carinata HOM05D001567 ORTHO05D001409 7.9e-58 228.0 229 63.8
Thhalv10002955m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 2.8e-55 219.5 243 58.8
AT3G25030 Arabidopsis thaliana HOM05D001567 ORTHO05D001409 4.9e-52 208.8 219 61.2
C07p11100 Brassica napus HOM05D001567 ORTHO05D001409 1.4e-51 207.2 229 59.8
CARHR218570 Cardamine hirsuta HOM05D001567 ORTHO05D001409 4.1e-38 162.5 232 50.4
AL9U11040 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 5.9e-37 158.7 237 48.5
Aa31LG9G4870 Aethionema arabicum HOM05D001567 ORTHO05D001409 7.6e-37 158.3 262 45.8
Sp7g10480 Schrenkiella parvula HOM05D001567 ORTHO05D001409 1.8e-33 147.1 230 47.4
Carub.0007s2962 Capsella rubella HOM05D001567 ORTHO05D001409 6.7e-33 145.2 249 44.2
Thhalv10026173m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 3.7e-31 139.4 228 45.2
THA.LOC104804618 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 9.1e-30 134.8 274 40.9
AT4G13100 Arabidopsis thaliana HOM05D001567 ORTHO05D001409 1.1e-27 127.9 220 44.1
THA.LOC104808795 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 1.2e-26 124.4 216 45.4
COL.COLO4_15668 Corchorus olitorius HOM05D001567 ORTHO05D001409 5.9e-13 79.0 102 47.1
Cpa.g.sc8.141 Carica papaya HOM05D001567 ORTHO05D001409 1.9e-11 73.9 100 45.0
Thecc.01G224200 Theobroma cacao HOM05D001567 ORTHO05D001409 3.6e-10 69.7 102 43.1
Duzib138G0369 Durio zibethinus HOM05D001567 ORTHO05D001409 4.7e-10 69.3 344 27.6
Duzib133G0221 Durio zibethinus HOM05D001567 ORTHO05D001409 8.0e-10 68.6 88 45.5
Gohir.D07G207000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 8.0e-10 68.6 286 32.5
Haze_24814 Corylus avellana HOM05D001567 ORTHO05D001409 1.0e-09 68.2 124 41.1
Aa31LG8G12030 Aethionema arabicum HOM05D001567 ORTHO05D001409 1.4e-09 67.8 105 43.8
Manes.12G045900 Manihot esculenta HOM05D001567 ORTHO05D001409 1.8e-09 67.4 106 37.7
QL09p053337 Quercus lobata HOM05D001567 ORTHO05D001409 6.7e-09 65.5 155 34.8
Solyc09g059990.1 Solanum lycopersicum HOM05D001567 ORTHO05D001409 6.7e-09 65.5 221 31.7
Sopen09g023160 Solanum pennellii HOM05D001567 ORTHO05D001409 8.8e-09 65.1 221 30.8
Gohir.A07G200700 Gossypium hirsutum HOM05D001567 ORTHO05D001409 1.2e-08 64.7 302 29.8
Duzib211G0659 Durio zibethinus HOM05D001567 ORTHO05D001409 2.6e-08 63.5 306 28.1
Gorai.001G233400 Gossypium raimondii HOM05D001567 ORTHO05D001409 2.6e-08 63.5 303 29.7
Ciclev10020442m.g Citrus clementina HOM05D001567 ORTHO05D001409 3.3e-08 63.2 104 41.3
TWI36G1781 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 3.3e-08 63.2 88 43.2
THA.LOC104822500 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 5.7e-08 62.4 88 39.8
TWI18G0295 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 7.5e-08 62.0 88 42.0
THA.LOC104818961 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 1.3e-07 61.2 91 40.7
Cfa002580 Carpinus fangiana HOM05D001567 ORTHO05D001409 1.7e-07 60.8 132 37.9
Aa31LG5G17680 Aethionema arabicum HOM05D001567 ORTHO05D001409 6.3e-07 58.9 105 38.1
vmacro14748 Vaccinium macrocarpon HOM05D001567 ORTHO05D001409 6.3e-07 58.9 295 27.8
Phvul.008G128400 Phaseolus vulgaris HOM05D001567 ORTHO05D001409 2.4e-06 57.0 89 38.2
Lalb_Chr03g0041691 Lupinus albus HOM05D001567 ORTHO05D001409 3.1e-06 56.6 98 35.7
Lj1g0000938 Lotus japonicus HOM05D001567 ORTHO05D001409 4.1e-06 56.2 91 39.6
Sabra02G0185500 Salix brachista HOM05D001567 ORTHO05D001409 5.3e-06 55.8 101 39.6
VMungo1383G0185 Vigna mungo HOM05D001567 ORTHO05D001409 5.3e-06 55.8 89 37.1
Thhalv10021010m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 7.0e-06 55.5 98 34.7
Nitab4.5_0000345g0110 Nicotiana tabacum HOM05D001567 ORTHO05D001409 7.0e-06 55.5 234 29.5
A03p35090 Brassica napus HOM05D001567 ORTHO05D001409 9.1e-06 55.1 100 37.0
BraA03t12688Z Brassica rapa HOM05D001567 ORTHO05D001409 9.1e-06 55.1 100 37.0
Potri.002G243800 Populus trichocarpa HOM05D001567 ORTHO05D001409 9.1e-06 55.1 101 38.6
Sp3g06060 Schrenkiella parvula HOM05D001567 ORTHO05D001409 9.1e-06 55.1 98 37.8
PGSC0003DMG400030177 Solanum tuberosum HOM05D001567 ORTHO05D001409 9.1e-06 55.1 229 28.8


User provided reference genes

Program Settings