Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 6.3e-183 644.0 340 100.0
AT1G66110 Arabidopsis thaliana HOM05D012346 ORTHO05D014859 6.1e-146 521.2 325 84.9
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 1.0e-108 397.5 323 63.5
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 1.7e-108 396.7 324 64.8
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 3.8e-103 379.0 327 60.6
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 2.4e-102 376.3 323 61.3
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 4.2e-102 375.6 323 61.3
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 7.1e-102 374.8 323 61.3
BraA07t30940Z Brassica rapa HOM05D012346 ORTHO05D014859 3.0e-100 369.4 326 60.1
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 8.7e-100 367.9 325 60.3
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 9.0e-97 357.8 306 63.1
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 1.6e-37 161.0 300 36.0
Thhalv10019694m.g Eutrema salsugineum HOM05D012346 ORTHO05D014859 3.8e-31 139.8 133 59.4
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.2e-19 101.7 295 29.2
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.8e-19 99.4 260 31.5
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.2e-16 91.7 239 32.2
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.0e-16 90.9 253 30.4
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.8e-16 89.0 262 30.5
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.0e-15 88.6 250 31.6
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.9e-15 86.7 263 30.0
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.0e-15 86.3 283 28.6
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.6e-15 85.9 301 26.9
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.6e-15 85.9 293 28.3
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 3.3e-14 83.6 303 26.7
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.3e-14 82.4 260 29.2
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 1.2e-13 81.6 303 28.7
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 6.2e-13 79.3 259 29.7
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-12 78.6 292 30.1
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-12 78.6 254 30.7
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.4e-12 78.2 303 29.4
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 2.3e-12 77.4 303 29.4
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.0e-12 76.6 317 27.4
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.2e-12 76.3 251 29.9
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 5.2e-12 76.3 300 25.3
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.2e-12 76.3 301 23.9
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 6.8e-12 75.9 321 27.7
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.9e-12 75.5 260 28.5
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 2.6e-11 73.9 203 27.1
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 2.6e-11 73.9 203 27.1
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.4e-11 73.6 247 28.3
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 5.8e-11 72.8 233 26.6
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 7.5e-11 72.4 300 27.0
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 7.5e-11 72.4 233 26.6
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 1.1e-09 68.6 236 27.1
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-09 68.6 260 28.5
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.9e-09 67.8 235 28.9
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 4.1e-09 66.6 264 25.0
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 4.1e-09 66.6 259 25.9
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 5.4e-09 66.2 259 26.3
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 2.7e-08 63.9 315 22.2
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.7e-08 63.9 279 24.7
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.0e-08 62.8 172 29.7
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 8.6e-07 58.9 238 28.6
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 8.6e-07 58.9 238 28.6
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 5.6e-06 56.2 146 28.8


User provided reference genes

Program Settings