Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 1.3e-180 636.3 325 100.0
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 2.0e-130 469.5 307 78.5
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 5.9e-130 468.0 308 78.6
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 2.1e-63 246.9 210 65.2
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 7.1e-59 231.9 325 43.4
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 4.6e-58 229.2 149 81.2
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.5e-42 176.4 274 40.5
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.3e-39 167.9 326 34.7
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 4.1e-38 162.9 287 37.6
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.5e-37 161.0 274 38.3
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.5e-37 161.0 274 38.3
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 4.5e-37 159.5 275 37.5
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.2e-36 157.1 303 34.3
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.8e-36 156.4 275 37.8
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.8e-36 156.4 275 37.8
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.8e-36 156.4 233 39.5
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.0e-36 156.0 301 34.9
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 8.5e-36 155.2 239 38.1
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.5e-35 152.5 312 32.7
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.2e-34 151.4 275 36.4
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.6e-34 151.0 257 37.7
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 4.6e-34 149.4 258 36.8
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.3e-33 147.1 271 35.1
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.0e-33 146.7 274 35.8
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 5.1e-33 146.0 276 37.0
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 5.1e-33 146.0 254 37.0
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 6.7e-33 145.6 302 31.8
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 8.7e-33 145.2 277 33.9
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-32 144.8 277 35.0
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.5e-32 144.4 259 36.3
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 4.3e-32 142.9 295 32.9
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 7.4e-32 142.1 239 38.9
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.2e-31 140.6 263 35.4
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.8e-31 140.2 258 36.8
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.4e-30 137.9 263 33.8
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.8e-30 137.5 277 32.9
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.8e-30 137.5 201 37.8
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.4e-30 137.1 242 36.0
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 2.4e-30 137.1 277 32.5
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 1.5e-29 134.4 176 44.9
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.0e-29 134.0 274 34.3
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 2.6e-29 133.7 157 47.8
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.4e-29 133.3 230 37.0
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 3.8e-28 129.8 236 37.3
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.8e-28 129.8 256 35.5
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 5.0e-28 129.4 235 37.0
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 6.5e-28 129.0 271 33.2
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 6.5e-28 129.0 271 33.2
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 1.1e-27 128.3 243 37.4
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.1e-27 128.3 240 37.1
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.4e-27 127.9 253 35.2
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-27 127.5 270 36.3
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 1.9e-27 127.5 240 37.1
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 4.2e-27 126.3 270 36.3
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 4.2e-27 126.3 270 36.3
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 5.5e-27 125.9 263 35.7
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 5.5e-27 125.9 263 35.7
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 5.5e-27 125.9 263 34.6
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 9.4e-27 125.2 259 35.9
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-26 124.8 260 35.0
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 1.2e-26 124.8 264 35.2
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 1.2e-26 124.8 243 37.0
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.6e-26 124.4 194 39.7
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.1e-26 124.0 253 33.2
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 2.7e-26 123.6 270 35.9
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 6.1e-26 122.5 263 35.0
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 7.9e-26 122.1 218 36.2
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 7.9e-26 122.1 218 36.2
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 3.0e-25 120.2 222 36.0
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 3.0e-25 120.2 262 31.7
CARHR057960 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.5e-24 117.9 107 59.8
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.4e-24 116.3 257 31.9
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-23 114.8 234 34.6
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 2.8e-23 113.6 259 31.7
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.4e-22 111.3 158 41.1
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 6.9e-22 109.0 284 29.6
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.2e-18 98.2 267 27.7
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 1.4e-17 94.7 134 44.0
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 3.0e-17 93.6 167 36.5
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 2.6e-16 90.5 99 49.5
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 5.0e-12 76.3 227 29.5
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.5e-11 72.8 298 25.8
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 1.6e-10 71.2 137 38.0
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 4.4e-08 63.2 101 35.6
TWI34G0543 Tripterygium wilfordii HOM05D000846 ORTHO05D001340 8.2e-07 58.9 205 26.3


User provided reference genes

Program Settings