Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 0.0e+00 1430.2 741 100.0
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 4.2e-301 1037.7 747 72.6
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.1e-127 460.7 718 41.8
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.9e-107 394.4 721 38.4
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-101 375.2 744 35.8
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 4.7e-98 363.2 619 38.9
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-97 361.7 705 36.5
AT2G15110 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 6.3e-95 352.8 718 35.8
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-90 338.6 746 34.6
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 4.7e-90 336.7 648 36.6
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 4.5e-85 320.1 685 34.9
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 6.5e-84 316.2 696 33.3
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-78 298.5 750 32.1
Carub.0004s1788 Capsella rubella HOM05D009492 ORTHO05D011693 4.5e-77 293.5 749 31.8
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 2.3e-76 291.2 699 33.0
Carub.0008s0741 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-67 261.9 749 30.4
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-64 252.3 527 34.9
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 5.7e-64 250.0 501 34.9
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-61 241.9 728 31.6
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-59 235.3 724 31.1
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 3.3e-59 234.2 679 30.3
Carub.0003s2830 Capsella rubella HOM05D009492 ORTHO05D011693 1.3e-55 222.2 620 30.0
Carub.0004s0637 Capsella rubella HOM05D009492 ORTHO05D011693 3.3e-51 207.6 643 30.8
Carub.0002s0970 Capsella rubella HOM05D009492 ORTHO05D011693 2.8e-42 177.9 678 28.9
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 7.8e-37 159.8 551 29.8
Carub.0014s0006 Capsella rubella HOM05D009492 ORTHO05D011693 1.3e-26 125.9 308 31.5
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-26 125.6 282 33.0
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.5e-24 117.5 208 30.8
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.9e-22 112.1 759 22.8
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.4e-22 110.5 700 22.6
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.1e-22 110.2 708 22.9
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 7.1e-22 110.2 207 33.3
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-20 105.5 139 37.4
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.3e-20 105.1 399 25.6
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.3e-20 105.1 699 23.0
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-19 102.4 191 31.4
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.3e-19 100.9 704 22.4
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.3e-19 100.9 277 27.4
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 4.3e-19 100.9 212 28.3
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.6e-19 100.5 706 21.5
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-19 100.5 189 32.3
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 2.1e-18 98.6 169 32.0
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-18 97.8 715 23.2
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 3.7e-18 97.8 668 23.8
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.8e-18 97.4 703 22.5
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-18 97.4 191 30.9
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.4e-17 95.9 177 28.8
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-16 92.0 697 22.4
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-16 92.0 136 34.6
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-16 91.7 125 37.6
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-16 91.3 757 21.5
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 3.4e-16 91.3 239 25.5
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-16 90.9 696 20.8
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.6e-16 90.1 697 21.5
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-15 89.4 323 25.7
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-15 89.0 172 29.7
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-15 88.6 267 27.0
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-15 87.8 172 29.1
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.4e-15 86.7 701 21.1
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-14 85.9 242 28.5
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.4e-14 85.9 178 28.7
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-14 85.5 292 24.0
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-14 84.3 156 30.1
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-14 84.0 138 32.6
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.1e-14 83.6 707 21.2
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 1.2e-13 82.8 181 32.0
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.5e-13 81.3 697 21.2
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-13 81.3 341 25.2
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 4.6e-13 80.9 211 26.5
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 7.9e-13 80.1 218 25.7
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 1.3e-12 79.3 228 28.1
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.3e-12 79.3 113 32.7
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.8e-12 79.0 113 32.7
AT3G43148 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.9e-12 77.8 87 43.7
Carub.0006s2612 Capsella rubella HOM05D016834 ORTHO05D016863 5.1e-12 77.4 135 30.4
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 5.1e-12 77.4 169 31.4
Sp7g05200 Schrenkiella parvula HOM05D002078 ORTHO05D005680 5.1e-12 77.4 164 28.0
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.7e-12 77.0 768 21.6
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-12 77.0 287 27.5
CARHR035710 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.7e-12 77.0 163 27.0
CARHR053560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.7e-12 77.0 146 27.4
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.7e-12 76.6 698 21.8
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 1.5e-11 75.9 168 31.0
AT3G30230 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.9e-11 75.5 91 42.9
Carub.0073s0002 Capsella rubella HOM05D016834 ORTHO05D016863 1.9e-11 75.5 315 24.4
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 2.5e-11 75.1 203 24.6
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 3.3e-11 74.7 151 31.1
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.6e-11 73.9 187 23.5
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-11 73.2 160 28.1
AT3G42060 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 1.3e-10 72.8 179 26.8
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-10 72.8 107 35.5
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-10 72.4 262 24.8
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 2.1e-10 72.0 342 23.4
AT1G36100 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 4.8e-10 70.9 92 39.1
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 4.8e-10 70.9 341 23.5
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 6.2e-10 70.5 180 26.7
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-09 69.7 108 34.3
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-09 69.3 700 20.6
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-09 68.6 138 30.4
Carub.0007s3091 Capsella rubella HOM05D016834 ORTHO05D016863 2.4e-09 68.6 361 24.4
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 4.0e-09 67.8 392 23.2
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 4.0e-09 67.8 138 29.0
BcaB03g14738 Brassica carinata HOM05D002078 ORTHO05D005680 5.3e-09 67.4 154 31.8
AT4G06688 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 9.0e-09 66.6 83 38.6
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 1.2e-08 66.2 207 22.2
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 1.5e-08 65.9 140 27.9
Carub.0004s1088 Capsella rubella HOM05D010629 ORTHO05D005680 2.0e-08 65.5 164 30.5
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 2.6e-08 65.1 175 28.6
Carub.0003s2886 Capsella rubella HOM05D016834 ORTHO05D016863 3.4e-08 64.7 340 23.2
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-08 64.3 94 35.1
Carub.0003s2807 Capsella rubella HOM05D010629 ORTHO05D005680 4.5e-08 64.3 136 30.1
BolC8t47514H Brassica oleracea HOM05D003421 ORTHO05D003268 5.8e-08 63.9 194 23.7
AT1G20400 Arabidopsis thaliana HOM05D011598 ORTHO05D013181 7.6e-08 63.5 344 23.3
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 7.6e-08 63.5 197 22.3
Carub.0007s3050 Capsella rubella HOM05D010629 ORTHO05D005680 7.6e-08 63.5 136 30.1
AT2G11010 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.3e-07 62.8 210 22.4
Thhalv10023163m.g Eutrema salsugineum HOM05D010629 ORTHO05D016863 1.3e-07 62.8 101 34.7
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 1.7e-07 62.4 340 22.9
AL2G20050 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 2.9e-07 61.6 238 28.2
Sp6g07550 Schrenkiella parvula HOM05D010772 ORTHO05D005680 2.9e-07 61.6 147 27.2
AL1G53160 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 3.8e-07 61.2 183 23.0
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-07 60.8 152 25.0
CARHR150680 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.5e-07 60.5 62 43.5
CARHR181090 Cardamine hirsuta HOM05D008458 ORTHO05D010628 6.5e-07 60.5 83 34.9
AL3G15920 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 8.4e-07 60.1 158 24.1
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-06 59.7 106 31.1
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-06 59.3 157 26.8
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 3.2e-06 58.2 166 25.3
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 4.2e-06 57.8 278 25.2
Carub.0005s0837 Capsella rubella HOM05D010629 ORTHO05D005680 5.5e-06 57.4 353 25.2
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 7.1e-06 57.0 303 23.4
BolC2t10336H Brassica oleracea HOM05D003421 ORTHO05D003268 7.1e-06 57.0 136 24.3
AT1G32010 Arabidopsis thaliana HOM05D010629 ORTHO05D019745 9.3e-06 56.6 352 25.0
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 9.3e-06 56.6 86 34.9
Sp7g11540 Schrenkiella parvula HOM05D010529 ORTHO05D012528 9.3e-06 56.6 126 30.2


User provided reference genes

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