Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G23050 Arabidopsis lyrata HOM05D000209 ORTHO05D014056 1.8e-50 202.2 98 100.0
Thhalv10022026m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.9e-25 117.5 96 66.7
Carub.0003s1295 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-15 85.5 94 51.1
AT1G66490 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.4e-15 83.6 92 52.2
AL3G25960 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-14 83.2 96 53.1
AL3G25680 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-14 82.4 94 51.1
AT3G13680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.6e-14 81.6 91 52.7
AT3G13820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.7e-14 81.3 95 52.6
AL3G25970 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.1e-14 80.9 95 49.5
AL5G24990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.1e-14 80.9 96 51.0
CARHR154640 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.4e-13 79.7 95 51.6
CARHR260760 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.3e-13 79.0 92 51.1
CARHR260790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.8e-13 77.0 94 50.0
AL3G25710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-12 76.3 93 48.4
BcaC01g03538 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-12 75.9 87 51.7
AT3G49510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.6e-12 75.5 82 52.4
AL1G35700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.4e-12 74.7 99 49.5
A08p13990 Brassica napus HOM05D000209 ORTHO05D014056 4.4e-12 74.7 80 52.5
BraA08t33390Z Brassica rapa HOM05D000209 ORTHO05D000129 4.4e-12 74.7 80 52.5
Thhalv10002786m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.4e-12 74.7 85 51.8
C03p51330 Brassica napus HOM05D000209 ORTHO05D000129 7.5e-12 73.9 87 50.6
Carub.0003s1313 Capsella rubella HOM05D000209 ORTHO05D000129 7.5e-12 73.9 98 49.0
Carub.0005s2337 Capsella rubella HOM05D000209 ORTHO05D000129 7.5e-12 73.9 95 51.6
Thhalv10019643m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.7e-11 71.6 86 50.0
AL5G29320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.8e-11 71.2 81 51.9
Carub.0008s1500 Capsella rubella HOM05D000209 ORTHO05D000129 6.3e-11 70.9 95 49.5
AL7G39300 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.3e-11 70.5 80 50.0
AT3G20030 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.3e-11 70.5 90 53.3
BolC3t17420H Brassica oleracea HOM05D000209 ORTHO05D000129 8.3e-11 70.5 86 50.0
Thhalv10003097m.g Eutrema salsugineum HOM05D000209 ORTHO05D014056 8.3e-11 70.5 84 50.0
AL3G25690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-10 70.1 93 47.3
BcaC01g00570 Brassica carinata HOM05D000209 ORTHO05D014056 1.4e-10 69.7 80 51.2
BolC3t20418H Brassica oleracea HOM05D000209 ORTHO05D014056 1.4e-10 69.7 80 51.2
AL3G27510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.4e-10 68.9 80 47.5
AL1G40170 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-10 68.6 99 42.4
AT3G49520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-10 68.6 77 49.4
CARHR223800 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.1e-10 68.6 91 47.3
BcaB04g19131 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-10 68.2 86 50.0
C03p51310 Brassica napus HOM05D000209 ORTHO05D000129 5.4e-10 67.8 86 47.7
AT1G11810 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.0e-10 67.4 94 43.6
AT3G19880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.0e-10 67.4 87 49.4
CARHR088870 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.0e-10 67.4 80 48.8
BcaB04g19128 Brassica carinata HOM05D000209 ORTHO05D000129 9.1e-10 67.0 87 48.3
Thhalv10009753m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 9.1e-10 67.0 100 48.0
AL1G40160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-09 66.6 101 43.6
AL3G33370 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-09 66.6 83 51.8
BcaC01g03537 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-09 66.6 86 48.8
Carub.0003s1362 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-09 66.6 81 45.7
A04p27850 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-09 66.2 90 44.4
C04p65350 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-09 66.2 90 44.4
CARHR088590 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.6e-09 66.2 96 42.7
AL5G29340 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-09 65.5 71 53.5
Carub.0003s1310 Capsella rubella HOM05D000209 ORTHO05D000129 2.7e-09 65.5 96 44.8
AL5G29310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.5e-09 65.1 79 46.8
Carub.0003s1977 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-09 65.1 83 48.2
Carub.0003s2963 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-09 65.1 92 45.7
CARHR088600 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.5e-09 65.1 97 43.3
CARHR088850 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.5e-09 65.1 81 49.4
CARHR095400 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.5e-09 65.1 77 49.4
AL1G21870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.5e-09 64.7 91 44.0
BraA04t18277Z Brassica rapa HOM05D000209 ORTHO05D000129 4.5e-09 64.7 90 43.3
AT1G24800 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-09 64.3 105 40.0
AT1G24881 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-09 64.3 105 40.0
AT1G25055 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-09 64.3 105 40.0
AT1G25150 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-09 64.3 105 40.0
AT1G25211 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.9e-09 64.3 105 40.0
BcaB01g00294 Brassica carinata HOM05D000209 ORTHO05D014056 5.9e-09 64.3 83 47.0
AL3G30470 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.7e-09 63.9 83 51.8
AL1G39630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.0e-08 63.5 104 45.2
BolC4t28014H Brassica oleracea HOM05D000209 ORTHO05D000129 1.0e-08 63.5 83 44.6
AL2G23590 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-08 63.2 91 41.8
BolC1t05025H Brassica oleracea HOM05D000209 ORTHO05D000129 1.3e-08 63.2 91 44.0
A05p15810 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-08 62.8 76 47.4
BraA05t20495Z Brassica rapa HOM05D000209 ORTHO05D000129 1.7e-08 62.8 76 47.4
CARHR095410 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-08 62.8 100 43.0
CARHR158520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-08 62.8 76 43.4
CARHR094260 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.2e-08 62.4 84 50.0
CARHR092940 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.9e-08 62.0 86 45.3
AL1G40180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.8e-08 61.6 90 46.7
AL2G18650 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.8e-08 61.6 86 45.3
BcaB07g32803 Brassica carinata HOM05D000209 ORTHO05D000129 3.8e-08 61.6 90 43.3
BcaC09g48375 Brassica carinata HOM05D000209 ORTHO05D000129 3.8e-08 61.6 91 42.9
A01p10800 Brassica napus HOM05D000209 ORTHO05D000129 3.8e-08 61.6 97 44.3
C01p50760 Brassica napus HOM05D000209 ORTHO05D000129 3.8e-08 61.6 91 42.9
AT1G54550 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.0e-08 61.2 75 49.3
AT4G17200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.0e-08 61.2 84 47.6
CARHR134370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.0e-08 61.2 92 46.7
Thhalv10023095m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.0e-08 61.2 76 47.4
A09p46300 Brassica napus HOM05D000209 ORTHO05D014056 6.5e-08 60.8 95 42.1
AT3G14030 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.5e-08 60.5 78 44.9
Carub.0001s1047 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-07 60.1 81 43.2
Carub.0001s2536 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-07 60.1 89 44.9
Carub.0003s1866 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-07 60.1 81 48.1
AT3G17620 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-07 59.7 81 48.1
AT3G19890 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-07 59.7 87 47.1
A01p39780 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-07 59.7 89 44.9
BraA01t04017Z Brassica rapa HOM05D000209 ORTHO05D000129 1.5e-07 59.7 89 44.9
Thhalv10024142m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.5e-07 59.7 75 49.3
AL2G23540 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-07 59.3 82 41.5
AL3G29780 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-07 59.3 72 44.4
A03p41270 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-07 59.3 90 40.0
CARHR025790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.9e-07 59.3 95 43.2
Thhalv10023848m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-07 59.3 90 47.8
AL3G29740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.5e-07 58.9 75 45.3
BraA03t13297Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-07 58.9 82 47.6
Carub.0003s1337 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-07 58.9 94 42.6
Carub.0003s2043 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-07 58.9 84 46.4
Carub.0005s1584 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-07 58.9 80 43.8
AT3G13830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.2e-07 58.5 89 40.4
CARHR092560 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.2e-07 58.5 51 60.8
CARHR158510 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.2e-07 58.5 74 45.9
BcaB06g28930 Brassica carinata HOM05D000209 ORTHO05D000129 4.2e-07 58.2 82 43.9
AL275U10020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.5e-07 57.8 93 47.3
C03p50600 Brassica napus HOM05D000209 ORTHO05D000129 5.5e-07 57.8 83 47.0
C04p65340 Brassica napus HOM05D000209 ORTHO05D000129 5.5e-07 57.8 80 45.0
BolC3t17334H Brassica oleracea HOM05D000209 ORTHO05D000129 5.5e-07 57.8 90 40.0
BolC3t17349H Brassica oleracea HOM05D000209 ORTHO05D000129 5.5e-07 57.8 83 47.0
BraA04t18276Z Brassica rapa HOM05D000209 ORTHO05D000129 5.5e-07 57.8 80 45.0
Carub.0003s1978 Capsella rubella HOM05D000209 ORTHO05D000129 5.5e-07 57.8 93 44.1
AL3G25930 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.2e-07 57.4 90 43.3
BcaC09g48335 Brassica carinata HOM05D000209 ORTHO05D000129 7.2e-07 57.4 98 43.9
A03p41890 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-07 57.4 83 45.8
C01p51240 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-07 57.4 98 43.9
C03p50730 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-07 57.4 82 47.6
BraA03t13343Z Brassica rapa HOM05D000209 ORTHO05D000129 7.2e-07 57.4 83 45.8
AL2G13920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.4e-07 57.0 68 47.1
AL3G30480 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.4e-07 57.0 86 50.0
AL3G30730 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.4e-07 57.0 80 45.0
AL3G34620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.4e-07 57.0 77 42.9
AL6G44790 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.4e-07 57.0 96 34.4
Carub.0003s1995 Capsella rubella HOM05D000209 ORTHO05D000129 9.4e-07 57.0 102 41.2
Carub.0003s2067 Capsella rubella HOM05D000209 ORTHO05D000129 9.4e-07 57.0 76 43.4
AT1G59680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-06 56.6 78 47.4
BcaB06g28955 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 92 41.3
BraA03t13281Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-06 56.6 90 38.9
Carub.0001s2538 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-06 56.6 107 39.3
CARHR092080 Cardamine hirsuta HOM05D000209 ORTHO05D014056 1.2e-06 56.6 73 45.2
BcaC01g03599 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-06 56.2 82 46.3
BcaC02g07611 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-06 56.2 81 38.3
C04p21200 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-06 56.2 88 40.9
BolC3t17361H Brassica oleracea HOM05D000209 ORTHO05D000129 1.6e-06 56.2 82 46.3
AL3G38080 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-06 55.8 75 46.7
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-06 55.8 73 43.8
A03p41930 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-06 55.8 78 44.9
BraA03t13347Z Brassica rapa HOM05D000209 ORTHO05D000129 2.1e-06 55.8 78 44.9
Carub.0001s2537 Capsella rubella HOM05D000209 ORTHO05D000129 2.1e-06 55.8 109 36.7
CARHR189820 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.1e-06 55.8 89 36.0
AL3G33440 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 77 44.2
BcaC05g26586 Brassica carinata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 75 46.7
BcaC05g26592 Brassica carinata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 75 46.7
BcaC09g48337 Brassica carinata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 98 43.9
C01p51360 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-06 55.5 98 43.9
C05p26320 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-06 55.5 75 46.7
BolC5t31357H Brassica oleracea HOM05D000209 ORTHO05D000129 2.7e-06 55.5 75 46.7
AL3G30920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-06 55.1 74 50.0
AL3G33700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-06 55.1 88 47.7
AL4G35660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-06 55.1 88 43.2
A05p33650 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-06 55.1 78 47.4
BolC5t32735H Brassica oleracea HOM05D013566 ORTHO05D014975 3.6e-06 55.1 83 47.0
BraA04t18465Z Brassica rapa HOM05D000209 ORTHO05D000129 3.6e-06 55.1 89 49.4
BraA05t22190Z Brassica rapa HOM05D000209 ORTHO05D000129 3.6e-06 55.1 78 47.4
Carub.0003s1975 Capsella rubella HOM05D000209 ORTHO05D000129 3.6e-06 55.1 72 47.2
CARHR088150 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.6e-06 55.1 88 43.2
BcaB06g28931 Brassica carinata HOM05D000209 ORTHO05D000129 4.7e-06 54.7 78 42.3
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 4.7e-06 54.7 88 43.2
C01p51070 Brassica napus HOM05D000209 ORTHO05D000129 4.7e-06 54.7 88 43.2
BolC1t05068H Brassica oleracea HOM05D000209 ORTHO05D000129 4.7e-06 54.7 88 43.2
BolC1t05080H Brassica oleracea HOM05D000209 ORTHO05D000129 4.7e-06 54.7 88 43.2
Sp3g32750 Schrenkiella parvula HOM05D000209 ORTHO05D014056 4.7e-06 54.7 91 42.9
BcaC05g28939 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-06 54.3 80 42.5
BcaC09g48331 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-06 54.3 88 42.0
BcaC09g48347 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-06 54.3 88 42.0
C01p51110 Brassica napus HOM05D000209 ORTHO05D000129 6.1e-06 54.3 88 42.0
C01p51320 Brassica napus HOM05D000209 ORTHO05D000129 6.1e-06 54.3 88 42.0
BcaB06g25682 Brassica carinata HOM05D000209 ORTHO05D000129 8.0e-06 53.9 84 44.0
Carub.0003s2032 Capsella rubella HOM05D000209 ORTHO05D000129 8.0e-06 53.9 88 40.9


User provided reference genes

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