Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 6.5e-260 900.2 458 100.0
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.2e-258 896.0 458 99.6
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.8e-255 884.8 458 98.7
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 3.3e-251 871.3 458 97.2
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 1.2e-245 852.8 459 95.2
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 4.4e-240 834.3 458 93.2
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 2.2e-239 832.0 459 92.4
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 3.7e-239 831.2 458 92.8
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 2.4e-238 828.6 459 92.4
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 7.0e-238 827.0 458 92.8
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 4.6e-237 824.3 459 91.9
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 1.3e-236 822.8 459 91.9
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 1.9e-235 818.9 456 92.1
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 8.9e-233 810.1 459 90.2
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 3.7e-231 804.7 459 90.6
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 2.1e-229 798.9 461 89.6
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 7.3e-219 763.8 460 83.9
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 4.8e-210 734.6 389 94.9
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 1.4e-209 733.0 382 95.5
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 3.8e-199 698.4 453 78.6
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 4.2e-198 694.9 455 77.1
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 4.2e-198 694.9 454 76.9
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 1.5e-195 686.4 451 76.9
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 5.6e-195 684.5 434 79.0
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 8.1e-194 680.6 435 79.3
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 1.1e-193 680.2 453 75.7
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 6.9e-193 677.6 406 82.5
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 1.2e-192 676.8 453 75.3
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 1.0e-191 673.7 453 75.1
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 4.9e-191 671.4 414 80.7
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 8.4e-191 670.6 455 79.8
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 8.4e-191 670.6 400 81.0
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 8.4e-191 670.6 452 75.0
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 1.9e-190 669.5 450 76.4
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 1.9e-190 669.5 400 81.0
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 4.2e-190 668.3 404 82.4
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 9.3e-190 667.2 393 83.5
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 1.2e-189 666.8 459 75.6
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 1.6e-189 666.4 459 74.7
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 2.1e-189 666.0 462 73.6
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 6.0e-189 664.5 455 74.9
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 6.0e-189 664.5 431 78.2
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 1.3e-188 663.3 398 80.7
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 3.0e-188 662.1 415 80.0
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 6.7e-188 661.0 451 75.4
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 8.7e-188 660.6 396 81.6
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 1.1e-187 660.2 451 74.9
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 1.5e-187 659.8 454 73.3
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 1.9e-187 659.4 411 78.3
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 3.3e-187 658.7 384 84.4
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 4.3e-187 658.3 463 73.0
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 5.7e-187 657.9 387 82.9
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 5.7e-187 657.9 439 74.3
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 7.4e-187 657.5 466 74.2
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 1.3e-186 656.8 458 74.0
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 1.6e-186 656.4 419 78.3
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 1.6e-186 656.4 390 82.8
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 1.6e-186 656.4 461 74.0
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 1.6e-186 656.4 432 76.4
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 2.8e-186 655.6 396 82.1
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 6.3e-186 654.4 386 81.1
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 6.3e-186 654.4 454 72.0
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 6.3e-186 654.4 421 78.4
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 2.4e-185 652.5 454 74.0
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 2.4e-185 652.5 454 71.6
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 4.1e-185 651.7 407 79.4
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 1.2e-184 650.2 457 73.3
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 1.2e-184 650.2 432 75.7
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 1.2e-184 650.2 455 74.3
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 2.0e-184 649.4 457 73.1
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 3.4e-184 648.7 439 74.9
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 7.6e-184 647.5 395 79.0
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 7.6e-184 647.5 383 81.2
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 7.6e-184 647.5 456 72.1
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 1.0e-183 647.1 439 73.3
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 1.0e-183 647.1 454 73.1
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 2.2e-183 646.0 432 74.8
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 2.2e-183 646.0 457 73.7
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 2.9e-183 645.6 380 81.8
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 2.9e-183 645.6 395 78.7
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 6.5e-183 644.4 459 71.7
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 1.9e-182 642.9 387 81.1
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 2.5e-182 642.5 394 80.7
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 3.2e-182 642.1 453 71.5
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 3.2e-182 642.1 454 71.1
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 3.2e-182 642.1 436 73.4
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 5.5e-182 641.3 460 72.2
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 9.3e-182 640.6 459 73.0
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 1.2e-181 640.2 385 80.5
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 1.6e-181 639.8 456 71.1
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 1.6e-181 639.8 455 71.4
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 3.6e-181 638.6 454 71.1
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 4.6e-181 638.3 428 74.1
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 6.1e-181 637.9 405 78.3
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 1.5e-179 633.3 451 71.2
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.5e-179 633.3 409 74.8
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.9e-179 632.9 451 70.7
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 3.3e-179 632.1 466 69.3
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 4.3e-179 631.7 451 70.5
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 6.3e-178 627.9 453 70.0
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 6.5e-175 617.8 444 69.8
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 3.6e-173 612.1 421 72.9
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 4.6e-173 611.7 404 73.5
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 1.8e-169 599.7 427 70.0
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 4.5e-168 595.1 404 73.5
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 1.1e-166 590.5 428 68.0
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 3.7e-154 548.9 356 72.2
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 4.8e-154 548.5 465 63.2
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.2e-152 543.9 279 98.9
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 3.0e-148 529.3 418 64.4
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.2e-147 527.3 371 74.1
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 2.8e-146 522.7 383 67.4
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 7.2e-142 508.1 469 60.6
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 7.2e-142 508.1 387 65.4
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 9.5e-142 507.7 453 60.9
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 2.7e-136 489.6 389 60.9
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 2.7e-136 489.6 345 73.3
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 4.7e-133 478.8 354 66.9
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 3.4e-131 472.6 365 63.6
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 2.2e-130 469.9 359 65.7
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 6.6e-127 458.4 276 80.8
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 4.1e-121 439.1 252 86.9
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 1.6e-120 437.2 289 71.3
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 3.5e-120 436.0 316 69.3
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 1.8e-116 423.7 288 75.0
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 3.4e-115 419.5 432 54.6
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 9.2e-113 411.4 367 59.4
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 5.2e-108 395.6 327 66.1
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 6.6e-103 378.6 234 84.6
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 3.6e-101 372.9 317 65.6
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 5.2e-100 369.0 256 74.2
Atru.chr2.2623 Acer truncatum HOM05D004538 ORTHO05D006068 1.4e-97 360.9 211 84.8
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 6.0e-96 355.5 358 53.4
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 1.2e-91 341.3 329 52.3
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 2.2e-90 337.0 203 78.3
Cc02_g29790 Coffea canephora HOM05D004538 ORTHO05D006068 1.2e-83 314.7 226 72.1
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 1.2e-75 288.1 211 68.7
Aqoxy2G00269 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 3.0e-71 273.5 174 76.4
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 1.2e-64 251.5 214 60.3
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 7.4e-62 242.3 214 58.9
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 2.4e-60 237.3 124 88.7
Haze_27104 Corylus avellana HOM05D004538 ORTHO05D163757 4.5e-59 233.0 372 40.3
Atru.chr2.2696 Acer truncatum HOM05D004538 ORTHO05D006068 2.9e-58 230.3 136 82.4
Haze_26959 Corylus avellana HOM05D004538 ORTHO05D165751 1.3e-53 214.9 291 41.6
SHI05856 Sapria himalayana HOM05D004538 ORTHO05D006068 7.4e-46 189.1 134 68.7
Duzib268G1762 Durio zibethinus HOM05D004538 ORTHO05D006068 9.7e-38 162.2 113 74.3
Aqoxy2G00270 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 6.3e-37 159.5 84 89.3
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 5.3e-36 156.4 112 73.2
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 1.1e-33 148.7 112 69.6
MSTRG.9065 Avicennia marina HOM05D004538 ORTHO05D006068 3.6e-32 143.7 144 56.9
MSTRG.9077 Avicennia marina HOM05D004538 ORTHO05D006068 6.6e-26 122.9 77 76.6
Atru.chr2.2679 Acer truncatum HOM05D004538 ORTHO05D052265 3.4e-22 110.5 231 34.6
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 2.8e-21 107.5 117 53.8
QL10p039376 Quercus lobata HOM05D004538 ORTHO05D006068 5.4e-20 103.2 83 63.9
MD02G1271500 Malus domestica HOM05D004538 ORTHO05D006068 5.0e-18 96.7 60 85.0
RcHm_v2.0_Chr6g0267421 Rosa chinensis HOM05D004538 ORTHO05D006068 4.3e-17 93.6 60 80.0
Cc02_g29820 Coffea canephora HOM05D004538 ORTHO05D006068 5.2e-15 86.7 68 64.7
ATR0499G019 Amborella trichopoda HOM05D004538 ORTHO05D006068 4.4e-14 83.6 58 62.1
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 6.4e-13 79.7 50 72.0
Atru.chr2.2641 Acer truncatum HOM05D004538 ORTHO05D052874 1.0e-10 72.4 44 77.3


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