Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22900 Arabidopsis lyrata HOM05D005593 ORTHO05D002225 5.7e-81 304.3 155 100.0
AL3G40780 Arabidopsis lyrata HOM05D002186 ORTHO05D002225 4.0e-34 148.7 109 78.9
AT3G25070 Arabidopsis thaliana HOM05D002186 ORTHO05D002225 5.4e-31 138.3 111 74.8
Carub.0003s2542 Capsella rubella HOM05D002186 ORTHO05D002225 4.6e-30 135.2 109 73.4
Thhalv10002991m.g Eutrema salsugineum HOM05D002186 ORTHO05D002225 1.7e-29 133.3 111 75.7
BcaC01g03246 Brassica carinata HOM05D002186 ORTHO05D002225 3.0e-21 105.9 114 68.4
BcaB06g26730 Brassica carinata HOM05D002186 ORTHO05D002225 6.7e-21 104.8 109 64.2
A03p44020 Brassica napus HOM05D002186 ORTHO05D002225 5.6e-20 101.7 110 64.5
BraA03t13533Z Brassica rapa HOM05D002186 ORTHO05D002225 5.6e-20 101.7 110 64.5
CARHR101410 Cardamine hirsuta HOM05D002186 ORTHO05D002225 4.8e-19 98.6 114 66.7
BcaB08g34432 Brassica carinata HOM05D002186 ORTHO05D002225 1.1e-18 97.4 112 62.5
Sp3g22670 Schrenkiella parvula HOM05D002186 ORTHO05D002225 1.4e-18 97.1 109 60.6
C07p11000 Brassica napus HOM05D002186 ORTHO05D002225 1.8e-18 96.7 151 49.7
BcaC06g35778 Brassica carinata HOM05D002186 ORTHO05D002225 2.4e-18 96.3 153 46.4
C03p54390 Brassica napus HOM05D002186 ORTHO05D002225 3.1e-18 95.9 115 64.3
BolC3t17726H Brassica oleracea HOM05D002186 ORTHO05D002225 3.1e-18 95.9 115 64.3
BolC7t41569H Brassica oleracea HOM05D002186 ORTHO05D002225 3.1e-18 95.9 151 47.0
Thhalv10002425m.g Eutrema salsugineum HOM05D005593 ORTHO05D006515 1.3e-11 73.9 76 56.6
AL3G40252 Arabidopsis lyrata HOM05D005593 ORTHO05D006515 1.1e-10 70.9 78 51.3
CARHR100960 Cardamine hirsuta HOM05D005593 ORTHO05D006515 1.1e-10 70.9 72 54.2
AT3G24630 Arabidopsis thaliana HOM05D005593 ORTHO05D006515 4.0e-10 68.9 73 54.8
THA.LOC104821655 Tarenaya hassleriana HOM05D002186 ORTHO05D002225 9.0e-10 67.8 114 43.0
BcaB06g26676 Brassica carinata HOM05D005593 ORTHO05D006515 4.5e-09 65.5 74 54.1
BcaC06g35744 Brassica carinata HOM05D005593 ORTHO05D006515 7.6e-09 64.7 32 90.6
A07p07590 Brassica napus HOM05D005593 ORTHO05D006515 7.6e-09 64.7 32 90.6
C07p11350 Brassica napus HOM05D005593 ORTHO05D006515 7.6e-09 64.7 32 90.6
BolC7t41613H Brassica oleracea HOM05D005593 ORTHO05D006515 7.6e-09 64.7 32 90.6
BolC7t41614H Brassica oleracea HOM05D005593 ORTHO05D006515 7.6e-09 64.7 32 90.6
BraA07t28551Z Brassica rapa HOM05D005593 ORTHO05D006515 7.6e-09 64.7 32 90.6
Aa31sc586G30 Aethionema arabicum HOM05D005593 ORTHO05D006515 1.0e-08 64.3 31 87.1
Sp3g22410 Schrenkiella parvula HOM05D005593 ORTHO05D006515 4.9e-08 62.0 106 46.2
THA.LOC104804597 Tarenaya hassleriana HOM05D005593 ORTHO05D006515 1.1e-07 60.8 32 81.2
Carub.0003s2504 Capsella rubella HOM05D005593 ORTHO05D006515 2.5e-07 59.7 104 45.2
Prupe.7G233100 Prunus persica HOM05D005593 ORTHO05D006515 3.5e-06 55.8 54 50.0


User provided reference genes

Program Settings