Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22440 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 3.2e-37 157.9 81 100.0
AT1G65510 Arabidopsis thaliana HOM05D009162 ORTHO05D015260 2.6e-34 148.3 81 92.6
CARHR057220 Cardamine hirsuta HOM05D009162 ORTHO05D015260 3.5e-31 137.9 81 85.2
Carub.0002s1130 Capsella rubella HOM05D009162 ORTHO05D015260 8.3e-25 116.7 85 76.5
Carub.0002s1132 Capsella rubella HOM05D009162 ORTHO05D015260 5.4e-24 114.0 85 75.3
BcaB05g24120 Brassica carinata HOM05D009162 ORTHO05D015260 2.0e-23 112.1 82 73.2
BolC2t08280H Brassica oleracea HOM05D009162 ORTHO05D015260 1.3e-22 109.4 82 70.7
BraA02t06381Z Brassica rapa HOM05D009162 ORTHO05D015260 1.7e-22 109.0 82 70.7
Thhalv10019385m.g Eutrema salsugineum HOM05D009162 ORTHO05D015260 2.6e-18 95.1 70 70.0
Aa31LG2G2500 Aethionema arabicum HOM05D009162 ORTHO05D015260 2.9e-17 91.7 83 63.9
Carub.0002s1133 Capsella rubella HOM05D009162 ORTHO05D015260 1.9e-16 89.0 83 62.7
AL2G22410 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 4.1e-16 87.8 51 92.2
BcaB01g02861 Brassica carinata HOM05D009162 ORTHO05D012456 1.2e-12 76.3 89 53.9
AL2G22400 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 2.0e-10 68.9 88 53.4
AL2G22390 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 3.4e-10 68.2 88 53.4
A06p04670 Brassica napus HOM05D009162 ORTHO05D012456 4.4e-10 67.8 88 51.1
BraA06t23670Z Brassica rapa HOM05D009162 ORTHO05D012456 5.8e-10 67.4 89 50.6
AL2G22430 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.7e-09 65.9 88 52.3
AT1G65490 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 1.7e-09 65.9 91 53.8
C06p02580 Brassica napus HOM05D009162 ORTHO05D012456 2.2e-09 65.5 88 50.0
BcaC08g43009 Brassica carinata HOM05D009162 ORTHO05D012456 2.9e-09 65.1 89 49.4
AT1G65500 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 4.9e-09 64.3 89 49.4
BolC6t35386H Brassica oleracea HOM05D009162 ORTHO05D012456 4.9e-09 64.3 89 49.4
Carub.0002s1129 Capsella rubella HOM05D009162 ORTHO05D012456 4.9e-09 64.3 77 51.9
AL2G22380 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 3.2e-08 61.6 83 54.2
Carub.0002s1127 Capsella rubella HOM05D009162 ORTHO05D012456 4.1e-08 61.2 77 48.1
CARHR057200 Cardamine hirsuta HOM05D009162 ORTHO05D012456 6.0e-07 57.4 88 52.3
AL2G22370 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 7.8e-07 57.0 91 46.2
Thhalv10019360m.g Eutrema salsugineum HOM05D009162 ORTHO05D012456 1.3e-06 56.2 78 48.7
Carub.0002s1126 Capsella rubella HOM05D009162 ORTHO05D012456 2.3e-06 55.5 59 61.0
AT1G65486 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 3.9e-06 54.7 79 44.3
Sp5g20410 Schrenkiella parvula HOM05D009162 ORTHO05D012456 3.9e-06 54.7 78 47.4


User provided reference genes

Program Settings