Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22410 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 1.3e-18 95.5 52 100.0
AT1G65510 Arabidopsis thaliana HOM05D009162 ORTHO05D015260 7.0e-17 89.7 51 92.2
AL2G22440 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 1.2e-16 89.0 51 92.2
CARHR057220 Cardamine hirsuta HOM05D009162 ORTHO05D015260 2.7e-16 87.8 51 88.2
Carub.0002s1130 Capsella rubella HOM05D009162 ORTHO05D015260 6.8e-12 73.2 52 76.9
BcaB05g24120 Brassica carinata HOM05D009162 ORTHO05D015260 1.7e-10 68.6 51 74.5
Carub.0002s1132 Capsella rubella HOM05D009162 ORTHO05D015260 3.7e-10 67.4 52 73.1
BraA02t06381Z Brassica rapa HOM05D009162 ORTHO05D015260 1.8e-09 65.1 51 72.5
BolC2t08280H Brassica oleracea HOM05D009162 ORTHO05D015260 4.1e-09 63.9 51 70.6
Carub.0002s1133 Capsella rubella HOM05D009162 ORTHO05D015260 1.7e-07 58.5 52 63.5
Aa31LG2G2500 Aethionema arabicum HOM05D009162 ORTHO05D015260 6.5e-07 56.6 53 66.0
AT1G65490 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 6.5e-07 56.6 52 63.5
AL2G22400 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.5e-06 55.5 54 61.1
BcaB01g02861 Brassica carinata HOM05D009162 ORTHO05D012456 1.9e-06 55.1 55 58.2
AL2G22390 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 2.5e-06 54.7 54 61.1
Thhalv10019385m.g Eutrema salsugineum HOM05D009162 ORTHO05D015260 2.5e-06 54.7 44 68.2
AL2G22430 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 9.5e-06 52.8 54 59.3
AT1G65500 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 9.5e-06 52.8 54 57.4


User provided reference genes

Program Settings