Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22400 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 2.5e-43 178.3 87 100.0
AL2G22390 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.2e-42 176.0 87 98.9
AL2G22430 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.2e-40 169.5 87 94.3
AT1G65500 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 8.6e-36 153.3 87 86.2
Carub.0002s1129 Capsella rubella HOM05D009162 ORTHO05D012456 5.1e-28 127.5 87 74.7
Carub.0002s1127 Capsella rubella HOM05D009162 ORTHO05D012456 4.3e-27 124.4 89 74.2
Carub.0002s1131 Capsella rubella HOM05D009162 ORTHO05D012456 4.9e-23 110.9 89 65.2
AL2G22370 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 1.4e-22 109.4 90 66.7
C06p02580 Brassica napus HOM05D009162 ORTHO05D012456 4.1e-22 107.8 87 64.4
A06p04670 Brassica napus HOM05D009162 ORTHO05D012456 9.2e-22 106.7 87 63.2
BcaB01g02861 Brassica carinata HOM05D009162 ORTHO05D012456 2.7e-21 105.1 88 63.6
BcaC08g43009 Brassica carinata HOM05D009162 ORTHO05D012456 1.0e-20 103.2 88 63.6
BolC6t35386H Brassica oleracea HOM05D009162 ORTHO05D012456 2.3e-20 102.1 88 63.6
BraA06t23670Z Brassica rapa HOM05D009162 ORTHO05D012456 2.3e-20 102.1 88 62.5
AT1G65486 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 6.6e-20 100.5 90 62.2
AT1G65490 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 1.6e-18 95.9 91 65.9
Thhalv10019360m.g Eutrema salsugineum HOM05D009162 ORTHO05D012456 9.9e-16 86.7 93 60.2
AL2G22380 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 8.4e-15 83.6 85 63.5
CARHR057220 Cardamine hirsuta HOM05D009162 ORTHO05D015260 1.2e-13 79.7 88 59.1
Sp5g20410 Schrenkiella parvula HOM05D009162 ORTHO05D012456 1.2e-13 79.7 91 56.0
AT1G65510 Arabidopsis thaliana HOM05D009162 ORTHO05D015260 4.6e-13 77.8 88 58.0
BcaB05g24120 Brassica carinata HOM05D009162 ORTHO05D015260 7.8e-13 77.0 87 54.0
CARHR057200 Cardamine hirsuta HOM05D009162 ORTHO05D012456 1.3e-12 76.3 90 58.9
Carub.0002s1133 Capsella rubella HOM05D009162 ORTHO05D015260 3.0e-12 75.1 87 50.6
BraA02t06381Z Brassica rapa HOM05D009162 ORTHO05D015260 3.9e-12 74.7 87 51.7
BolC2t08280H Brassica oleracea HOM05D009162 ORTHO05D015260 2.5e-11 72.0 87 50.6
Thhalv10019385m.g Eutrema salsugineum HOM05D009162 ORTHO05D015260 4.3e-11 71.2 81 56.8
AL2G22440 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 5.6e-11 70.9 88 53.4
Aa31LG2G2500 Aethionema arabicum HOM05D009162 ORTHO05D015260 8.1e-10 67.0 87 50.6
CARHR057190 Cardamine hirsuta HOM05D009162 ORTHO05D012456 9.0e-09 63.5 52 61.5
Carub.0002s1126 Capsella rubella HOM05D009162 ORTHO05D012456 1.3e-07 59.7 59 61.0
Carub.0002s1130 Capsella rubella HOM05D009162 ORTHO05D015260 1.7e-07 59.3 91 49.5
AL2G22410 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 3.2e-06 55.1 54 61.1


User provided reference genes

Program Settings