Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22390 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 6.6e-44 180.3 87 100.0
AL2G22400 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 5.6e-43 177.2 87 98.9
AL2G22430 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 6.1e-42 173.7 87 95.4
AT1G65500 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 4.6e-37 157.5 87 87.4
Carub.0002s1129 Capsella rubella HOM05D009162 ORTHO05D012456 3.5e-29 131.3 87 75.9
Carub.0002s1127 Capsella rubella HOM05D009162 ORTHO05D012456 2.3e-28 128.6 89 75.3
Carub.0002s1131 Capsella rubella HOM05D009162 ORTHO05D012456 2.6e-24 115.2 89 66.3
AL2G22370 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 9.9e-24 113.2 90 67.8
C06p02580 Brassica napus HOM05D009162 ORTHO05D012456 2.2e-23 112.1 87 65.5
A06p04670 Brassica napus HOM05D009162 ORTHO05D012456 4.9e-23 110.9 87 64.4
BcaC08g43009 Brassica carinata HOM05D009162 ORTHO05D012456 5.4e-22 107.5 88 64.8
BolC6t35386H Brassica oleracea HOM05D009162 ORTHO05D012456 1.2e-21 106.3 88 64.8
BraA06t23670Z Brassica rapa HOM05D009162 ORTHO05D012456 1.2e-21 106.3 88 63.6
BcaB01g02861 Brassica carinata HOM05D009162 ORTHO05D012456 2.1e-21 105.5 88 63.6
AT1G65486 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 4.6e-21 104.4 90 63.3
AT1G65490 Arabidopsis thaliana HOM05D009162 ORTHO05D012456 8.6e-20 100.1 91 67.0
Thhalv10019360m.g Eutrema salsugineum HOM05D009162 ORTHO05D012456 9.9e-16 86.7 93 60.2
AL2G22380 Arabidopsis lyrata HOM05D009162 ORTHO05D012456 6.4e-15 84.0 85 63.5
Sp5g20410 Schrenkiella parvula HOM05D009162 ORTHO05D012456 8.4e-15 83.6 91 57.1
CARHR057200 Cardamine hirsuta HOM05D009162 ORTHO05D012456 9.2e-14 80.1 90 60.0
CARHR057220 Cardamine hirsuta HOM05D009162 ORTHO05D015260 9.2e-14 80.1 88 59.1
BcaB05g24120 Brassica carinata HOM05D009162 ORTHO05D015260 7.8e-13 77.0 87 54.0
AT1G65510 Arabidopsis thaliana HOM05D009162 ORTHO05D015260 1.3e-12 76.3 88 56.8
Carub.0002s1133 Capsella rubella HOM05D009162 ORTHO05D015260 2.3e-12 75.5 87 50.6
BraA02t06381Z Brassica rapa HOM05D009162 ORTHO05D015260 3.9e-12 74.7 87 51.7
BolC2t08280H Brassica oleracea HOM05D009162 ORTHO05D015260 2.5e-11 72.0 87 50.6
Thhalv10019385m.g Eutrema salsugineum HOM05D009162 ORTHO05D015260 3.3e-11 71.6 81 56.8
AL2G22440 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 5.6e-11 70.9 88 53.4
Aa31LG2G2500 Aethionema arabicum HOM05D009162 ORTHO05D015260 6.2e-10 67.4 87 50.6
Carub.0002s1130 Capsella rubella HOM05D009162 ORTHO05D015260 9.0e-09 63.5 91 50.5
CARHR057190 Cardamine hirsuta HOM05D009162 ORTHO05D012456 9.0e-09 63.5 52 61.5
Carub.0002s1126 Capsella rubella HOM05D009162 ORTHO05D012456 5.8e-08 60.8 59 61.0
AL2G22410 Arabidopsis lyrata HOM05D009162 ORTHO05D015260 3.2e-06 55.1 54 61.1
Carub.0002s1132 Capsella rubella HOM05D009162 ORTHO05D015260 3.2e-06 55.1 91 47.3


User provided reference genes

Program Settings