Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.7e-148 529.3 253 100.0
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.5e-146 521.5 253 97.2
AL7G11610 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 2.4e-139 498.8 243 97.5
AL5G12750 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 5.4e-139 497.7 243 97.1
AL1G59760 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.6e-138 496.1 243 97.1
AL1G50260 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.5e-138 495.0 251 93.6
AL2G19880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.7e-129 466.1 269 85.9
AL6G41880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 4.9e-124 448.0 214 98.6
AL9U11430 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.1e-107 393.7 251 77.3
Carub.0001s3686 Capsella rubella HOM05D012762 ORTHO05D011313 2.1e-26 123.6 253 31.6
Carub.0006s2623 Capsella rubella HOM05D012762 ORTHO05D011313 3.6e-26 122.9 249 30.9
Carub.0002s1156 Capsella rubella HOM05D011333 ORTHO05D011313 1.1e-25 121.3 268 29.9
Carub.0007s3609 Capsella rubella HOM05D011333 ORTHO05D011313 5.2e-25 119.0 275 29.5
Carub.0149s0001 Capsella rubella HOM05D011333 ORTHO05D011313 5.2e-25 119.0 255 29.8
AL5G17280 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 6.8e-25 118.6 210 34.3
AL7G50330 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 8.3e-23 111.7 208 32.2
Carub.0001s3421 Capsella rubella HOM05D012762 ORTHO05D011313 1.9e-22 110.5 254 30.7
Carub.0016s0014 Capsella rubella HOM05D012762 ORTHO05D011313 3.2e-22 109.8 253 29.2
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 9.2e-22 108.2 263 28.1
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 7.3e-19 98.6 252 27.8
Carub.0003s2757 Capsella rubella HOM05D011333 ORTHO05D011313 1.2e-16 91.3 251 27.5
Carub.0012s0009 Capsella rubella HOM05D011333 ORTHO05D011313 2.0e-16 90.5 247 25.9
Carub.0076s0002 Capsella rubella HOM05D012762 ORTHO05D011313 3.8e-15 86.3 236 28.4
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 3.2e-14 83.2 227 27.3
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.4e-14 82.4 235 27.2
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.4e-14 82.4 241 27.0
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 7.1e-14 82.0 232 27.2
Carub.0001s3396 Capsella rubella HOM05D011333 ORTHO05D011313 7.1e-14 82.0 244 25.0
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.6e-13 80.9 235 27.2
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-11 74.3 254 25.6
BcaC04g21059 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-11 73.9 224 26.8
BcaC03g17782 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-11 72.4 230 26.1
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 1.6e-10 70.9 254 25.2
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 4.7e-10 69.3 251 26.7
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.2e-10 68.9 213 26.3
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.2e-10 68.9 213 26.3
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.2e-10 68.9 213 26.3
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.2e-10 68.9 213 26.3
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.2e-10 68.9 213 26.3
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 6.2e-10 68.9 251 25.9
BcaC02g07867 Brassica carinata HOM05D000353 ORTHO05D000174 6.2e-10 68.9 224 25.9
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.4e-09 67.8 247 25.9
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 1.8e-09 67.4 245 25.7
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.4e-09 67.0 247 25.9
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.4e-09 67.0 247 25.9
BcaC02g07795 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-09 67.0 264 23.9
BolC9t55696H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-09 67.0 264 23.9
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 4.0e-09 66.2 228 27.2
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-09 66.2 226 25.7
BcaB03g16823 Brassica carinata HOM05D000353 ORTHO05D000174 5.2e-09 65.9 223 26.0
C01p40510 Brassica napus HOM05D000353 ORTHO05D000174 9.0e-09 65.1 228 25.4
BcaC09g49290 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-08 64.7 224 25.4
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-08 64.7 226 25.7
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-08 63.9 254 26.0
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-08 63.5 250 25.6
C05p51080 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-08 63.2 221 24.4
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 4.4e-08 62.8 247 23.5
C03p46930 Brassica napus HOM05D000353 ORTHO05D000174 5.8e-08 62.4 241 25.3
BcaC05g28066 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-07 61.2 226 24.8
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-07 61.2 247 23.9
C05p40800 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-07 61.2 226 24.8
C09p45710 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-07 61.2 228 24.6
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-07 60.5 234 23.5
BolC1t03183H Brassica oleracea HOM05D000353 ORTHO05D000174 2.2e-07 60.5 235 26.8
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 2.9e-07 60.1 234 24.8
C04p64600 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-07 60.1 229 24.0
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 3.8e-07 59.7 246 25.2
A05p20920 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-07 59.7 229 24.0
C08p30740 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-07 59.7 229 24.0
BolC1t04067H Brassica oleracea HOM05D000353 ORTHO05D000174 3.8e-07 59.7 229 24.0
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 3.8e-07 59.7 246 24.4
BraA05t20997Z Brassica rapa HOM05D000353 ORTHO05D000174 3.8e-07 59.7 229 24.0
C09p29030 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-07 59.3 83 33.7
BolC7t44430H Brassica oleracea HOM05D000353 ORTHO05D000174 4.9e-07 59.3 83 33.7
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 6.4e-07 58.9 242 24.8
A04p27050 Brassica napus HOM05D000353 ORTHO05D000174 8.4e-07 58.5 223 24.2
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-06 58.2 228 24.6
BolC7t44984H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-06 57.8 243 24.7
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 1.9e-06 57.4 223 24.2
BcaB03g15167 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-06 57.4 80 35.0
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-06 57.4 224 25.4
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-06 57.4 224 25.4
BraA08t32474Z Brassica rapa HOM05D000353 ORTHO05D000174 1.9e-06 57.4 229 24.9
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-06 57.0 238 24.4
C04p11940 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-06 57.0 247 22.7
AL2G19950 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.2e-06 56.6 220 26.4
BcaC03g14055 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-06 56.6 83 31.3
BcaC05g25257 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-06 56.6 229 26.6
BcaNung03554 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-06 56.6 83 31.3
Sp6g07340 Schrenkiella parvula HOM05D000353 ORTHO05D000174 3.2e-06 56.6 238 23.9
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 5.4e-06 55.8 238 25.2
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 5.4e-06 55.8 224 25.0
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 5.4e-06 55.8 246 25.2
BcaC07g40033 Brassica carinata HOM05D000353 ORTHO05D000174 7.1e-06 55.5 205 23.9
BcaC08g47014 Brassica carinata HOM05D000353 ORTHO05D000174 9.3e-06 55.1 80 33.8
BolC9t53770H Brassica oleracea HOM05D000353 ORTHO05D000174 9.3e-06 55.1 80 32.5


User provided reference genes

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