Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 1.0e-41 172.9 83 100.0
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 8.5e-41 169.9 83 98.8
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-40 169.5 81 100.0
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 1.4e-40 169.1 81 98.8
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-40 169.1 83 98.8
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-40 169.1 83 98.8
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-40 169.1 83 98.8
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-40 169.1 83 98.8
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 2.5e-40 168.3 83 97.6
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 3.2e-40 167.9 80 100.0
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 3.2e-40 167.9 80 100.0
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 4.6e-39 164.1 78 98.7
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 6.1e-39 163.7 78 98.7
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.0e-38 162.9 77 100.0
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.0e-38 162.9 78 98.7
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.0e-38 162.9 78 98.7
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.0e-38 162.9 78 98.7
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 1.4e-38 162.5 83 95.2
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 1.8e-38 162.2 84 96.4
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 96.4
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 2.3e-38 161.8 83 91.6
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 3.0e-38 161.4 79 96.2
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 3.0e-38 161.4 79 96.2
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 76 100.0
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 3.0e-38 161.4 76 100.0
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 3.9e-38 161.0 78 97.4
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 3.9e-38 161.0 76 98.7
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 6.7e-38 160.2 79 96.2
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 1.1e-37 159.5 76 98.7
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 1.1e-37 159.5 77 97.4
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 1.5e-37 159.1 76 98.7
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 2.0e-37 158.7 77 97.4
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 3.3e-37 157.9 74 100.0
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 3.3e-37 157.9 74 100.0
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 3.3e-37 157.9 74 100.0
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 3.3e-37 157.9 74 100.0
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 3.3e-37 157.9 74 100.0
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 3.3e-37 157.9 74 100.0
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 3.3e-37 157.9 74 100.0
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 3.3e-37 157.9 74 100.0
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 3.3e-37 157.9 74 100.0
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 4.3e-37 157.5 76 97.4
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 1.3e-36 156.0 77 97.4
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 2.2e-36 155.2 76 97.4
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 2.8e-36 154.8 76 96.1
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 3.7e-36 154.5 76 98.7
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 2.4e-35 151.8 83 91.6
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 2.4e-35 151.8 83 91.6
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.5e-34 149.1 71 100.0
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.5e-34 149.1 71 100.0
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 9.4e-32 139.8 83 84.3
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 1.2e-31 139.4 85 82.4
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 3.9e-30 134.4 76 86.8
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 3.9e-30 134.4 67 95.5
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 6.7e-30 133.7 64 98.4
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 1.5e-29 132.5 67 94.0
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 3.3e-29 131.3 76 84.2
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 3.3e-29 131.3 76 84.2
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 3.3e-29 131.3 76 84.2
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 3.3e-29 131.3 76 84.2
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 5.7e-29 130.6 62 100.0
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 5.7e-29 130.6 62 100.0
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 1.7e-28 129.0 64 95.3
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 2.2e-28 128.6 63 96.8
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 2.8e-28 128.3 76 81.6
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.2e-26 122.9 63 90.5
Lalb_Chr20g0115471 Lupinus albus HOM05D000388 ORTHO05D004227 1.3e-25 119.4 69 84.1
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 2.9e-25 118.2 61 91.8
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 3.8e-25 117.9 83 73.5
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 5.0e-25 117.5 59 94.9
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 1.5e-24 115.9 59 93.2
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 5.5e-24 114.0 58 93.1
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 9.4e-24 113.2 53 98.1
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 1.6e-23 112.5 56 94.6
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 2.1e-23 112.1 58 91.4
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 3.6e-23 111.3 74 77.0
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 6.1e-23 110.5 52 100.0
Gohir.A06G120306 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.4e-22 109.4 52 98.1
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 3.3e-21 104.8 50 100.0
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 1.7e-20 102.4 54 94.4
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 1.4e-19 99.4 59 76.3
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 1.8e-19 99.0 68 73.5
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 3.1e-19 98.2 46 100.0
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 7.0e-19 97.1 74 67.6
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 9.1e-19 96.7 55 87.3
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 2.0e-18 95.5 47 93.6
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 2.0e-18 95.5 73 63.0
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 1.3e-17 92.8 54 83.3
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 1.7e-17 92.4 76 64.5
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 3.8e-17 91.3 62 74.2
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 6.5e-17 90.5 76 61.8
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 9.4e-16 86.7 40 100.0
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.6e-15 85.9 41 100.0
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.8e-14 82.4 42 90.5
Peaxi162Scf00284g01052 Petunia axillaris HOM05D000388 ORTHO05D004227 3.0e-14 81.6 50 80.0
GSVIVG01008500001 Vitis vinifera HOM05D000388 ORTHO05D004227 1.1e-11 73.2 53 67.9
FAN07G1458 Fragaria x ananassa HOM05D000388 ORTHO05D004227 1.8e-11 72.4 37 86.5
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 1.8e-11 72.4 36 94.4
Lsat_1_v5_gn_8_105481 Lactuca sativa HOM05D000388 ORTHO05D004227 6.5e-09 63.9 43 69.8
Eucgr.J00123 Eucalyptus grandis HOM05D000388 ORTHO05D004227 1.8e-06 55.8 27 92.6


User provided reference genes

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