Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 5.0e-51 204.1 103 100.0
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 1.3e-46 189.5 99 97.0
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 1.3e-46 189.5 99 97.0
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 1.4e-45 186.0 99 94.9
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 4.1e-45 184.5 99 93.9
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 5.4e-45 184.1 99 93.9
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 5.4e-45 184.1 99 93.9
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 5.4e-45 184.1 99 93.9
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 5.4e-45 184.1 99 93.9
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 5.4e-45 184.1 99 93.9
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 5.4e-45 184.1 99 93.9
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 5.4e-45 184.1 99 93.9
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 5.4e-45 184.1 99 93.9
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 5.4e-45 184.1 99 93.9
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 5.4e-45 184.1 99 93.9
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 3.5e-44 181.4 99 93.9
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 3.5e-44 181.4 99 91.9
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 6.0e-44 180.6 99 91.9
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 1.3e-43 179.5 99 89.9
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 6.6e-43 177.2 99 89.9
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 1.1e-42 176.4 94 94.7
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 1.1e-42 176.4 99 89.9
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 1.5e-42 176.0 97 90.7
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 1.5e-42 176.0 99 88.9
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 2.5e-42 175.3 99 87.9
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 2.5e-42 175.3 99 87.9
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.3e-42 174.5 99 89.9
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 4.3e-42 174.5 99 89.9
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 5.6e-42 174.1 99 87.9
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 5.6e-42 174.1 99 87.9
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.3e-42 173.7 99 88.9
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.3e-42 173.7 99 88.9
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.3e-42 173.7 99 88.9
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 7.3e-42 173.7 99 88.9
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 1.6e-41 172.6 99 87.9
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 2.8e-41 171.8 99 86.9
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 3.6e-41 171.4 99 86.9
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 3.6e-41 171.4 101 85.1
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 3.6e-41 171.4 101 85.1
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 3.6e-41 171.4 101 85.1
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 1.8e-40 169.1 99 86.9
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 1.8e-40 169.1 99 86.9
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 1.8e-40 169.1 99 86.9
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 4.4e-39 164.5 99 83.8
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 5.8e-39 164.1 99 83.8
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 5.8e-39 164.1 99 82.8
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 2.9e-38 161.8 98 83.7
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 6.4e-38 160.6 99 81.8
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.9e-37 159.1 99 81.8
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 2.4e-37 158.7 99 83.8
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 9.2e-37 156.8 86 88.4
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.6e-36 156.0 98 83.7
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 7.8e-36 153.7 99 79.8
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 1.3e-35 152.9 99 81.8
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 1.7e-35 152.5 99 79.8
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 2.3e-35 152.1 86 88.4
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 6.6e-35 150.6 91 81.3
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 3.3e-34 148.3 99 76.8
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 5.6e-34 147.5 86 86.0
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 2.1e-33 145.6 94 78.7
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 2.8e-33 145.2 91 82.4
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 3.6e-33 144.8 99 76.8
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 8.1e-33 143.7 86 83.7
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 2.6e-31 138.7 99 70.7
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 1.1e-29 133.3 79 84.8
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 2.4e-29 132.1 70 87.1
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 7.8e-28 127.1 72 83.3
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 2.5e-26 122.1 97 69.1
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 3.3e-26 121.7 76 80.3
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 7.3e-26 120.6 72 86.1
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 7.3e-26 120.6 99 67.7
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 4.0e-24 114.8 98 62.2
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-23 112.5 54 96.3
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 1.2e-20 103.2 64 84.4
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 5.1e-19 97.8 49 89.8
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 1.1e-18 96.7 54 85.2
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 4.8e-17 91.3 62 77.4
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 1.1e-16 90.1 57 82.5
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 1.4e-16 89.7 49 85.7
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 5.8e-15 84.3 91 54.9
arahy.Tifrunner.gnm1.ann1.90KAHV Arachis hypogaea HOM05D000388 ORTHO05D009843 3.5e-12 75.1 97 53.6
arahy.Tifrunner.gnm1.ann1.A3NG1I Arachis hypogaea HOM05D000388 ORTHO05D009843 1.3e-11 73.2 52 71.2
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 3.9e-11 71.6 51 78.4
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 1.9e-10 69.3 51 76.5
Sopen10g013070 Solanum pennellii HOM05D000388 ORTHO05D009843 8.1e-09 63.9 32 90.6
BolC9t56932H Brassica oleracea HOM05D000388 ORTHO05D009843 9.0e-08 60.5 26 100.0
arahy.Tifrunner.gnm1.ann1.EPB7VR Arachis hypogaea HOM05D000176 ORTHO05D000106 1.2e-07 60.1 42 69.0


User provided reference genes

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