Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 3.8e-160 568.2 293 100.0
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 8.7e-157 557.0 293 98.3
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 5.6e-148 527.7 300 92.3
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.5e-143 511.1 297 89.9
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 8.2e-139 497.3 295 84.7
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.5e-135 485.7 296 83.4
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 2.3e-133 479.2 293 82.6
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 3.9e-133 478.4 293 81.6
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 2.8e-131 472.2 293 81.2
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.7e-128 463.0 293 80.5
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.6e-126 456.4 283 80.2
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 7.4e-124 447.6 299 77.3
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 9.7e-124 447.2 296 79.1
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.3e-123 446.8 298 78.9
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.4e-122 443.4 297 78.1
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 1.8e-122 443.0 297 78.1
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 2.4e-122 442.6 280 79.3
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 7.0e-122 441.0 295 78.6
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 1.2e-121 440.3 299 78.3
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 2.9e-120 435.6 300 77.3
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 1.0e-112 410.6 301 70.8
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 2.2e-112 409.5 291 72.5
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 4.2e-111 405.2 286 71.0
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 5.5e-111 404.8 286 71.0
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 2.1e-110 402.9 288 72.2
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 8.0e-110 401.0 289 70.6
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.8e-109 399.8 286 71.3
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 2.3e-109 399.4 302 69.5
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 1.2e-108 397.1 300 70.3
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 1.5e-108 396.7 292 70.2
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 7.5e-108 394.4 291 71.1
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 7.5e-108 394.4 287 68.3
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 9.7e-108 394.0 293 69.6
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 2.2e-107 392.9 282 70.2
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.2e-107 392.9 284 70.1
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 2.8e-107 392.5 291 68.7
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 8.3e-107 391.0 288 66.7
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 1.1e-106 390.6 281 71.2
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 1.8e-106 389.8 290 68.6
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 4.1e-106 388.7 287 67.6
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 9.1e-106 387.5 289 69.9
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 1.6e-105 386.7 288 66.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 5.9e-105 384.8 289 68.9
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 7.7e-105 384.4 299 66.9
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.7e-104 383.3 289 67.1
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 6.5e-104 381.3 269 72.1
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 6.5e-104 381.3 295 68.1
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 1.1e-103 380.6 278 66.9
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.1e-103 380.6 302 65.6
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 2.5e-103 379.4 291 69.8
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 2.5e-103 379.4 292 65.1
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.6e-102 376.7 289 65.7
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 4.7e-102 375.2 328 61.3
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 2.3e-101 372.9 293 64.5
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 2.3e-101 372.9 287 67.9
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 3.0e-101 372.5 279 64.9
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 2.6e-100 369.4 286 65.7
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 3.4e-100 369.0 297 63.6
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 3.4e-100 369.0 295 63.1
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 4.4e-100 368.6 286 65.7
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 2.2e-99 366.3 292 64.4
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 2.2e-99 366.3 270 67.4
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 3.7e-99 365.5 301 66.1
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 1.1e-98 364.0 275 64.7
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.4e-98 362.8 301 64.1
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 4.1e-98 362.1 293 64.5
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 4.1e-98 362.1 312 62.8
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 1.2e-97 360.5 291 64.6
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.2e-97 360.5 288 64.9
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 5.9e-97 358.2 279 66.7
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.0e-96 357.5 301 63.5
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 6.6e-96 354.8 289 63.7
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 3.3e-95 352.4 287 63.4
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 1.2e-94 350.5 290 63.4
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 1.0e-93 347.4 292 59.6
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 1.4e-93 347.1 298 64.8
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.4e-93 347.1 306 60.8
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 4.0e-93 345.5 282 64.2
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.5e-92 343.6 283 62.5
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 2.6e-92 342.8 273 64.8
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 4.4e-92 342.0 330 58.2
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 5.7e-92 341.7 282 62.8
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.3e-91 340.5 281 63.0
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 2.8e-91 339.3 282 62.4
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 7.8e-89 331.3 238 67.6
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 1.1e-87 327.4 310 59.4
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 1.6e-86 323.6 281 61.6
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.2e-84 317.4 281 58.4
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 2.2e-83 313.2 303 55.8
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 2.2e-83 313.2 278 62.2
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 4.9e-83 312.0 287 58.2
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 8.3e-83 311.2 288 57.6
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.1e-82 308.9 243 68.3
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 2.0e-81 306.6 290 55.9
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 6.0e-81 305.1 187 81.3
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 2.3e-77 293.1 298 55.7
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.4e-74 283.9 223 61.9
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 1.4e-74 283.9 296 50.7
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 2.5e-71 273.1 205 69.3
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 4.7e-70 268.9 209 63.6
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.1e-65 253.4 182 68.7
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 8.1e-62 241.5 200 62.5
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 2.2e-59 233.4 277 47.3
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 4.9e-59 232.3 297 45.5
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 5.4e-58 228.8 189 64.0
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 5.6e-55 218.8 164 67.1
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.4e-53 213.4 141 68.8
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.9e-51 205.7 175 62.3
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 8.4e-51 204.9 223 52.5
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 1.9e-47 193.7 273 41.8
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 4.3e-47 192.6 164 65.9
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 4.3e-47 192.6 195 51.3
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.1e-46 190.3 283 38.9
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.3e-43 181.0 272 36.4
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.8e-43 179.5 160 60.6
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 1.9e-42 177.2 122 75.4
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.0e-40 169.9 154 60.4
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 3.1e-37 159.8 86 91.9
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 5.3e-37 159.1 154 59.1
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 1.1e-31 141.4 89 73.0
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.5e-31 141.0 86 79.1
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.8e-29 134.0 113 69.0
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.4e-28 129.8 125 56.8
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 6.5e-27 125.6 89 61.8
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 7.9e-25 118.6 119 57.1
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 4.3e-23 112.8 110 60.9
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 2.6e-20 103.6 269 32.0
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 3.4e-20 103.2 97 67.0
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 7.2e-18 95.5 76 68.4
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 2.7e-17 93.6 110 51.8
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 3.6e-17 93.2 107 53.3
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.0e-16 91.7 240 30.0
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 9.4e-10 68.6 169 29.0


User provided reference genes

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