Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 1.8e-134 482.6 248 100.0
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 4.1e-131 471.5 248 96.4
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 4.5e-130 468.0 248 95.6
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 5.0e-121 438.0 248 87.9
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 8.5e-121 437.2 249 88.4
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.1e-120 436.8 248 87.9
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.1e-120 436.8 248 87.9
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 1.4e-120 436.4 248 87.9
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 3.2e-120 435.3 248 86.7
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 1.2e-119 433.3 248 85.5
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.6e-119 433.0 248 87.1
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 2.1e-119 432.6 248 87.1
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 1.2e-114 416.8 248 85.1
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 4.8e-108 394.8 252 78.2
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 5.2e-102 374.8 252 75.4
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 4.8e-100 368.2 253 74.3
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 3.1e-99 365.5 253 73.5
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 1.6e-98 363.2 252 73.4
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 3.5e-98 362.1 254 72.0
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 5.9e-98 361.3 252 72.6
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 5.9e-98 361.3 252 72.6
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 7.7e-98 360.9 253 72.3
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 1.0e-97 360.5 251 73.3
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.7e-97 359.8 252 71.8
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 2.3e-97 359.4 252 71.8
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 2.3e-97 359.4 264 71.6
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 3.8e-97 358.6 252 72.2
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 8.6e-97 357.5 252 70.2
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 1.1e-96 357.1 252 72.6
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.3e-96 355.5 253 71.9
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.2e-95 353.6 278 67.3
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 1.2e-95 353.6 252 72.2
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 2.3e-94 349.4 235 72.3
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 3.0e-94 349.0 253 69.6
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 4.0e-94 348.6 254 70.1
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 4.0e-94 348.6 264 68.9
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 6.8e-94 347.8 254 70.1
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 6.8e-94 347.8 249 69.1
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 1.5e-93 346.7 255 68.2
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.5e-93 346.7 253 69.2
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 7.5e-93 344.4 255 68.6
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 7.5e-93 344.4 254 68.5
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 9.8e-93 344.0 253 69.2
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 9.8e-93 344.0 254 68.1
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 2.2e-92 342.8 255 68.6
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 2.8e-92 342.4 248 70.6
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 3.7e-92 342.0 252 69.0
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 3.7e-92 342.0 249 68.7
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 4.9e-92 341.7 252 69.4
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 6.3e-92 341.3 252 68.3
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 8.3e-92 340.9 232 73.3
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 1.1e-91 340.5 284 64.4
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 1.8e-91 339.7 243 67.1
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 2.4e-91 339.3 255 67.5
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 2.4e-91 339.3 249 68.7
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 4.1e-91 338.6 254 67.3
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 5.4e-91 338.2 254 68.9
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 7.0e-91 337.8 247 67.6
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 1.6e-90 336.7 252 67.5
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 1.6e-90 336.7 248 67.7
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 4.5e-90 335.1 254 68.1
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.3e-89 333.6 227 73.1
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 2.3e-89 332.8 254 66.5
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 6.6e-89 331.3 250 67.2
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 8.6e-89 330.9 253 64.4
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 3.3e-88 328.9 253 66.8
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 5.6e-88 328.2 253 66.8
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 5.6e-88 328.2 256 66.8
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 9.5e-88 327.4 248 66.9
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 9.5e-88 327.4 248 67.7
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 1.2e-87 327.0 253 64.0
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.1e-87 326.2 253 66.4
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 2.8e-87 325.9 267 64.0
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 3.6e-87 325.5 248 64.9
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 3.6e-87 325.5 255 65.9
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 4.7e-87 325.1 249 65.9
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.4e-86 323.6 233 69.5
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 5.2e-86 321.6 243 65.0
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.5e-85 320.1 242 66.5
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 7.5e-85 317.8 242 66.1
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 2.9e-84 315.8 276 59.1
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 1.4e-83 313.5 246 63.4
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 5.4e-83 311.6 241 66.0
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 1.7e-81 306.6 222 69.8
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.0e-81 305.1 220 70.5
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 2.5e-80 302.8 214 71.0
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.5e-80 302.8 220 69.1
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 2.5e-80 302.8 254 60.6
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 4.0e-78 295.4 252 61.9
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 2.0e-77 293.1 206 69.4
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 1.7e-76 290.0 242 63.2
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 4.1e-75 285.4 220 67.7
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 4.1e-75 285.4 220 65.9
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 4.1e-75 285.4 251 62.2
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 1.6e-74 283.5 280 55.4
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 3.9e-73 278.9 249 59.4
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.1e-72 277.3 222 64.9
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.9e-72 276.6 222 64.4
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 5.6e-72 275.0 222 64.4
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 6.2e-71 271.6 244 56.6
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 6.4e-68 261.5 237 54.9
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 2.4e-67 259.6 179 72.1
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.2e-66 257.3 253 51.8
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 5.6e-64 248.4 229 58.5
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 2.0e-61 240.0 223 59.2
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 1.0e-57 227.6 243 51.4
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.4e-54 216.5 207 53.6
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 5.4e-51 205.3 196 54.6
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.7e-49 200.3 148 69.6
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.9e-48 196.8 240 45.8
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 3.0e-25 119.8 223 34.5
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 1.4e-19 100.9 121 47.9
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 9.4e-19 98.2 224 32.1
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.6e-18 97.4 84 57.1
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 1.5e-16 90.9 64 65.6
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 1.5e-16 90.9 64 65.6
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 2.6e-13 80.1 229 31.0


User provided reference genes

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