Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G19960 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 5.0e-70 267.7 139 100.0
AL2G19870 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.9e-62 241.9 129 97.7
AT1G65120 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 3.1e-56 221.9 129 88.4
Carub.0002s1060 Capsella rubella HOM05D003941 ORTHO05D009447 3.0e-38 162.2 138 65.9
CARHR056630 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.5e-26 123.2 120 53.3
CARHR038560 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.1e-24 117.1 120 50.8
Sp3g03240 Schrenkiella parvula HOM05D003941 ORTHO05D009447 7.3e-21 104.4 123 44.7
CARHR038520 Cardamine hirsuta HOM05D003941 ORTHO05D009447 6.8e-19 97.8 134 43.3
BcaC05g30202 Brassica carinata HOM05D003941 ORTHO05D009447 1.2e-18 97.1 130 43.8
BcaC05g30233 Brassica carinata HOM05D003941 ORTHO05D009447 2.0e-18 96.3 130 40.0
Carub.0002s1061 Capsella rubella HOM05D003941 ORTHO05D009447 5.8e-18 94.7 122 44.3
CARHR056610 Cardamine hirsuta HOM05D003941 ORTHO05D009447 3.8e-17 92.0 114 44.7
Thhalv10019959m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 4.9e-17 91.7 130 36.9
A02p13070 Brassica napus HOM05D003941 ORTHO05D009447 1.9e-16 89.7 100 43.0
BraA02t06363Z Brassica rapa HOM05D003941 ORTHO05D009447 1.9e-16 89.7 100 43.0
A05p43090 Brassica napus HOM05D003941 ORTHO05D009447 2.4e-16 89.4 130 40.0
SpUn0054_0050 Schrenkiella parvula HOM05D003941 ORTHO05D009447 9.3e-16 87.4 126 38.9
Carub.0002s1057 Capsella rubella HOM05D003941 ORTHO05D009447 1.2e-15 87.0 137 38.7
AT1G65130 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.6e-15 86.7 103 40.8
AL2G19840 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 6.0e-15 84.7 120 43.3
AT1G65110 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 5.1e-14 81.6 93 44.1
AL2G19970 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 6.6e-14 81.3 103 39.8
A05p43100 Brassica napus HOM05D003941 ORTHO05D009447 6.6e-14 81.3 134 38.8
CARHR056760 Cardamine hirsuta HOM05D003941 ORTHO05D009447 2.5e-13 79.3 111 43.2
BraA05t23053Z Brassica rapa HOM05D003941 ORTHO05D009447 3.3e-13 79.0 134 38.1
C05p62840 Brassica napus HOM05D003941 ORTHO05D009447 5.6e-13 78.2 121 41.3
C02p21210 Brassica napus HOM05D003941 ORTHO05D009447 7.3e-13 77.8 100 41.0
BcaC05g29948 Brassica carinata HOM05D003941 ORTHO05D009447 1.6e-12 76.6 121 40.5
BolC5t34939H Brassica oleracea HOM05D003941 ORTHO05D009447 1.6e-12 76.6 121 40.5
BcaC03g14681 Brassica carinata HOM05D003941 ORTHO05D009447 2.1e-12 76.3 100 40.0
BolC2t08261H Brassica oleracea HOM05D003941 ORTHO05D009447 2.1e-12 76.3 100 40.0
BcaB05g24093 Brassica carinata HOM05D003941 ORTHO05D009447 2.4e-11 72.8 100 40.0
AL2G20130 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 4.0e-11 72.0 123 34.1
AL8G38700 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 4.0e-11 72.0 73 46.6
Aa31LG2G2340 Aethionema arabicum HOM05D003941 ORTHO05D009447 1.3e-09 67.0 76 44.7
AT5G61940 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.3e-09 67.0 72 44.4
CARHR056690 Cardamine hirsuta HOM05D003941 ORTHO05D032292 1.7e-09 66.6 111 35.1
AT5G51530 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.1e-08 63.9 139 31.7
CARHR275710 Cardamine hirsuta HOM05D003941 ORTHO05D009447 5.4e-08 61.6 125 32.0
CARHR275730 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.2e-07 60.5 102 35.3
AT1G65200 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.6e-07 60.1 127 33.1
AT1G52450 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 2.1e-07 59.7 129 29.5
AL2G20180 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.7e-07 59.3 138 29.0
AT5G61950 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 2.7e-07 59.3 110 36.4
Sp2g25130 Schrenkiella parvula HOM05D003941 ORTHO05D009447 4.6e-07 58.5 107 35.5
Carub.0008s2262 Capsella rubella HOM05D003941 ORTHO05D009447 7.9e-07 57.8 124 36.3
Thhalv10005598m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 7.9e-07 57.8 110 31.8
Thhalv10005669m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 1.0e-06 57.4 73 37.0
AT1G52430 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 3.0e-06 55.8 73 39.7
Thhalv10017593m.g Eutrema salsugineum HOM05D003941 ORTHO05D012174 3.0e-06 55.8 127 32.3
AT2G27650 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 3.9e-06 55.5 133 30.8
A02p13090 Brassica napus HOM05D003941 ORTHO05D009447 3.9e-06 55.5 126 27.8
BraA02t06365Z Brassica rapa HOM05D003941 ORTHO05D009447 3.9e-06 55.5 126 27.8
CARHR275720 Cardamine hirsuta HOM05D003941 ORTHO05D009447 3.9e-06 55.5 73 39.7
AL8G38710 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 5.1e-06 55.1 110 35.5
BcaC03g14683 Brassica carinata HOM05D003941 ORTHO05D009447 5.1e-06 55.1 126 27.8
Carub.0004s1590 Capsella rubella HOM05D003941 ORTHO05D012174 5.1e-06 55.1 91 37.4
THA.LOC104821885 Tarenaya hassleriana HOM05D003941 ORTHO05D012174 5.1e-06 55.1 114 30.7
Carub.0004s1588 Capsella rubella HOM05D003941 ORTHO05D012174 6.6e-06 54.7 99 36.4
Carub.0002s1065 Capsella rubella HOM05D003941 ORTHO05D009447 8.7e-06 54.3 71 40.8


User provided reference genes

Program Settings