Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G19880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 8.1e-235 816.6 391 100.0
AL7G11610 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.2e-207 724.9 391 91.0
AL5G12750 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 7.2e-207 723.8 391 90.8
AL1G59760 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 8.2e-203 710.3 384 90.9
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.4e-130 470.3 269 85.9
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 4.2e-130 468.8 265 86.0
AL1G50260 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 4.6e-129 465.3 263 85.2
AL6G41880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 8.4e-115 417.9 240 85.4
AL9U11430 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.4e-98 364.0 263 69.6
Carub.0001s3686 Capsella rubella HOM05D012762 ORTHO05D011313 3.6e-33 146.7 241 33.2
Carub.0002s1156 Capsella rubella HOM05D011333 ORTHO05D011313 1.1e-32 145.2 250 32.0
Carub.0007s3609 Capsella rubella HOM05D011333 ORTHO05D011313 1.2e-31 141.7 268 32.1
Carub.0149s0001 Capsella rubella HOM05D011333 ORTHO05D011313 1.7e-30 137.9 249 31.3
Carub.0016s0014 Capsella rubella HOM05D012762 ORTHO05D011313 6.4e-30 136.0 241 30.3
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 8.3e-30 135.6 251 29.9
Carub.0001s3421 Capsella rubella HOM05D012762 ORTHO05D011313 3.5e-28 130.2 242 31.4
Carub.0006s2623 Capsella rubella HOM05D012762 ORTHO05D011313 1.3e-27 128.3 251 29.5
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 9.5e-26 122.1 251 29.9
AL5G17280 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 1.2e-25 121.7 232 31.5
Carub.0003s2757 Capsella rubella HOM05D011333 ORTHO05D011313 1.3e-22 111.7 244 28.7
Carub.0012s0009 Capsella rubella HOM05D011333 ORTHO05D011313 1.1e-21 108.6 237 27.8
Carub.0076s0002 Capsella rubella HOM05D012762 ORTHO05D011313 4.1e-21 106.7 241 27.8
Carub.0001s3396 Capsella rubella HOM05D011333 ORTHO05D011313 7.8e-20 102.4 248 25.8
AL7G50330 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 1.0e-19 102.1 232 28.9
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.5e-18 97.4 243 28.8
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.3e-18 96.7 243 28.8
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 7.3e-18 95.9 240 28.3
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-17 95.1 243 28.4
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-17 95.1 239 28.9
BcaC04g21059 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-16 91.7 224 28.1
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-16 91.7 239 28.5
BcaC03g17782 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-16 90.5 230 27.4
BcaC02g07867 Brassica carinata HOM05D000353 ORTHO05D000174 5.2e-16 89.7 224 27.7
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 5.2e-16 89.7 233 27.5
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-15 88.6 234 27.8
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-15 87.8 248 25.0
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.4e-15 87.0 248 25.0
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.4e-15 87.0 248 25.0
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 3.4e-15 87.0 234 28.2
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 4.4e-15 86.7 236 30.1
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 7.6e-15 85.9 236 29.2
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.9e-14 84.0 255 25.1
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-14 83.6 230 27.8
BcaC02g07795 Brassica carinata HOM05D000353 ORTHO05D000174 4.9e-14 83.2 252 26.6
BolC9t55696H Brassica oleracea HOM05D000353 ORTHO05D000174 4.9e-14 83.2 252 26.6
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-13 82.0 221 28.1
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-13 82.0 221 28.1
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-13 82.0 221 28.1
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-13 82.0 221 28.1
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-13 82.0 221 28.1
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-13 82.0 230 27.8
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-13 81.3 234 26.9
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-13 80.5 237 29.1
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 4.2e-13 80.1 235 26.0
C01p40510 Brassica napus HOM05D000353 ORTHO05D000174 7.1e-13 79.3 232 27.6
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 9.3e-13 79.0 205 25.9
BcaC09g49290 Brassica carinata HOM05D000353 ORTHO05D000174 9.3e-13 79.0 228 27.6
C03p46930 Brassica napus HOM05D000353 ORTHO05D000174 9.3e-13 79.0 233 25.8
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 9.3e-13 79.0 236 28.4
BcaC05g28066 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-12 78.6 230 27.0
C05p40800 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-12 78.6 230 27.0
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 1.6e-12 78.2 231 25.1
BcaB03g16823 Brassica carinata HOM05D000353 ORTHO05D000174 4.6e-12 76.6 231 27.7
C09p45710 Brassica napus HOM05D000353 ORTHO05D000174 6.0e-12 76.3 229 27.1
BcaC03g14055 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-11 73.6 229 24.5
BcaNung03554 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-11 73.6 229 24.5
BolC7t44984H Brassica oleracea HOM05D000353 ORTHO05D000174 3.9e-11 73.6 231 26.8
BraA08t32474Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-10 72.0 229 24.9
Sp6g07340 Schrenkiella parvula HOM05D000353 ORTHO05D000174 1.1e-10 72.0 240 26.2
A04p27050 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-10 71.2 229 23.6
BcaC07g40033 Brassica carinata HOM05D000353 ORTHO05D000174 2.5e-10 70.9 209 25.8
AL1G26420 Arabidopsis lyrata HOM05D003358 ORTHO05D003864 3.3e-10 70.5 247 25.1
A05p20920 Brassica napus HOM05D000353 ORTHO05D000174 7.3e-10 69.3 229 23.1
C08p30740 Brassica napus HOM05D000353 ORTHO05D000174 7.3e-10 69.3 229 23.1
BolC1t04067H Brassica oleracea HOM05D000353 ORTHO05D000174 7.3e-10 69.3 229 23.1
BraA05t20997Z Brassica rapa HOM05D000353 ORTHO05D000174 7.3e-10 69.3 229 23.1
BraA08t32932Z Brassica rapa HOM05D000353 ORTHO05D000174 7.3e-10 69.3 229 23.6
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 9.6e-10 68.9 233 26.2
Carub.0001s3689 Capsella rubella HOM05D011333 ORTHO05D011313 9.6e-10 68.9 173 26.6
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-09 68.6 232 25.9
BcaC03g18358 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-09 67.8 178 25.3
AL2G19950 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.6e-09 67.0 229 27.5
Carub.0005s0866 Capsella rubella HOM05D012762 ORTHO05D011313 3.6e-09 67.0 217 23.5
A03p65240 Brassica napus HOM05D000353 ORTHO05D000174 6.2e-09 66.2 228 22.4
BraA03t15581Z Brassica rapa HOM05D000353 ORTHO05D000174 6.2e-09 66.2 228 22.4
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 8.1e-09 65.9 231 26.4
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 8.1e-09 65.9 232 23.7
BolC1t03183H Brassica oleracea HOM05D000353 ORTHO05D000174 8.1e-09 65.9 239 26.4
BolC9t53770H Brassica oleracea HOM05D000353 ORTHO05D000174 8.1e-09 65.9 184 26.1
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-08 65.5 232 25.4
arahy.Tifrunner.gnm1.ann1.N18BUU Arachis hypogaea HOM05D002441 ORTHO05D008317 1.4e-08 65.1 225 21.8
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-08 65.1 231 26.0
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-08 65.1 231 26.4
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-08 64.7 233 24.0
BcaC05g25257 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-08 64.7 231 26.8
A07p20350 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-08 64.3 237 25.7
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-08 63.9 232 25.4
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-08 63.9 237 25.7
A03p30400 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-08 63.9 237 25.7
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-08 63.9 237 25.7
BolC5t34161H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-08 63.9 237 24.5
Thhalv10023889m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.1e-08 63.9 225 23.1
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 5.3e-08 63.2 233 25.3
BcaC04g20210 Brassica carinata HOM05D000353 ORTHO05D000174 5.3e-08 63.2 231 25.5
BolC4t25735H Brassica oleracea HOM05D000353 ORTHO05D000174 5.3e-08 63.2 184 25.5
AL7G42920 Arabidopsis lyrata HOM05D039756 ORTHO05D079283 6.9e-08 62.8 106 36.8
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 6.9e-08 62.8 231 25.5
Carub.0001s3651 Capsella rubella HOM05D000353 ORTHO05D000174 6.9e-08 62.8 234 25.2
AL7G11670 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 9.0e-08 62.4 229 27.1
BcaB03g16430 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-07 62.0 228 23.2
BcaB06g27257 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-07 62.0 228 22.4
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-07 62.0 233 26.2
BraA03t14653Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-07 61.6 229 23.1
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 2.0e-07 61.2 231 25.5
BcaB02g11004 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-07 60.8 231 25.5
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-07 60.5 231 25.1
AL4G20350 Arabidopsis lyrata HOM05D000493 ORTHO05D001355 4.5e-07 60.1 29 86.2
BcaC03g13459 Brassica carinata HOM05D000353 ORTHO05D000174 5.8e-07 59.7 154 27.3
AL8G17270 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 7.6e-07 59.3 183 26.8
BcaB03g15167 Brassica carinata HOM05D000353 ORTHO05D000174 7.6e-07 59.3 133 27.8
C09p29030 Brassica napus HOM05D000353 ORTHO05D000174 7.6e-07 59.3 83 33.7
BolC7t44430H Brassica oleracea HOM05D000353 ORTHO05D000174 7.6e-07 59.3 83 33.7
Carub.0008s0729 Capsella rubella HOM05D012762 ORTHO05D011313 9.9e-07 58.9 127 28.3
C02p34900 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-06 58.5 190 25.8
Lsat_1_v5_gn_5_130081 Lactuca sativa HOM05D007823 ORTHO05D000174 1.3e-06 58.5 242 22.7
C09p36920 Brassica napus HOM05D000096 ORTHO05D000174 1.7e-06 58.2 242 26.4
BolC9t56522H Brassica oleracea HOM05D000096 ORTHO05D000174 1.7e-06 58.2 242 26.4
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 1.7e-06 58.2 243 25.5
BolC6t35446H Brassica oleracea HOM05D000353 ORTHO05D000174 2.2e-06 57.8 184 24.5
ECA246G3040 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.9e-06 57.4 249 24.1
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 4.9e-06 56.6 231 22.9
BraA10t43581Z Brassica rapa HOM05D000353 ORTHO05D000174 4.9e-06 56.6 184 23.9
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 6.4e-06 56.2 138 30.4
Carub.0001s3393 Capsella rubella HOM05D012762 ORTHO05D011313 6.4e-06 56.2 117 30.8


User provided reference genes

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