Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G19850 Arabidopsis lyrata HOM05D009882 ORTHO05D014327 4.1e-52 207.6 92 100.0
AL2G19860 Arabidopsis lyrata HOM05D009882 ORTHO05D014327 2.8e-45 184.9 92 88.0
AT1G65113 Arabidopsis thaliana HOM05D009882 ORTHO05D014327 2.4e-44 181.8 93 87.1
Carub.0002s1058 Capsella rubella HOM05D009882 ORTHO05D014327 5.5e-41 170.6 92 81.5
Carub.0002s1059 Capsella rubella HOM05D009882 ORTHO05D014327 2.7e-40 168.3 92 78.3
AL6G44490 Arabidopsis lyrata HOM05D009882 ORTHO05D014327 7.2e-25 117.1 94 55.3
CARHR056620 Cardamine hirsuta HOM05D009882 ORTHO05D014327 7.2e-25 117.1 77 68.8
AT4G10457 Arabidopsis thaliana HOM05D009882 ORTHO05D014327 8.0e-24 113.6 93 54.8
C03p19130 Brassica napus HOM05D009882 ORTHO05D014327 3.4e-22 108.2 93 52.7
BolC3t14302H Brassica oleracea HOM05D009882 ORTHO05D014327 5.7e-22 107.5 93 52.7
BraA03t10916Z Brassica rapa HOM05D009882 ORTHO05D014327 6.3e-21 104.0 93 51.6
AL6G44410 Arabidopsis lyrata HOM05D009882 ORTHO05D014327 4.7e-16 87.8 65 56.9
AL6G44430 Arabidopsis lyrata HOM05D009882 ORTHO05D038548 2.4e-12 75.5 93 40.9
Carub.0006s2917 Capsella rubella HOM05D009882 ORTHO05D038548 9.2e-12 73.6 93 41.9
AL1G26060 Arabidopsis lyrata HOM05D009882 ORTHO05D018440 1.2e-11 73.2 97 39.2
Thhalv10009469m.g Eutrema salsugineum HOM05D009882 ORTHO05D018440 1.6e-11 72.8 93 40.9
Thhalv10029258m.g Eutrema salsugineum HOM05D009882 ORTHO05D014327 5.9e-11 70.9 67 49.3
Carub.0001s1386 Capsella rubella HOM05D009882 ORTHO05D018440 3.8e-10 68.2 100 41.0
AL3G31350 Arabidopsis lyrata HOM05D011909 ORTHO05D014045 3.3e-09 65.1 93 39.8
AT1G08695 Arabidopsis thaliana HOM05D012267 ORTHO05D014432 9.5e-09 63.5 93 35.5
Aa31LG6G15990 Aethionema arabicum HOM05D009882 ORTHO05D014327 1.6e-08 62.8 86 39.5
Carub.0003s1790 Capsella rubella HOM05D011909 ORTHO05D014045 2.1e-08 62.4 89 37.1
AT5G45875 Arabidopsis thaliana HOM05D011909 ORTHO05D014045 3.6e-08 61.6 95 36.8
Carub.0003s1788 Capsella rubella HOM05D011909 ORTHO05D014045 1.4e-07 59.7 90 37.8
A03p53320 Brassica napus HOM05D009869 ORTHO05D011947 1.8e-07 59.3 95 34.7
A03p53290 Brassica napus HOM05D009869 ORTHO05D011947 3.0e-07 58.5 92 31.5
BraA08t35126Z Brassica rapa HOM05D009882 ORTHO05D018440 3.0e-07 58.5 92 33.7
A08p32050 Brassica napus HOM05D009882 ORTHO05D018440 4.0e-07 58.2 92 32.6
C07p51580 Brassica napus HOM05D009869 ORTHO05D011947 4.0e-07 58.2 95 33.7
C07p51590 Brassica napus HOM05D009869 ORTHO05D011947 4.0e-07 58.2 95 33.7
C07p51610 Brassica napus HOM05D009869 ORTHO05D011947 6.8e-07 57.4 95 32.6
C08p49850 Brassica napus HOM05D012267 ORTHO05D014432 6.8e-07 57.4 93 33.3
BolC8t52514H Brassica oleracea HOM05D012267 ORTHO05D014432 6.8e-07 57.4 93 33.3
C08p16530 Brassica napus HOM05D009882 ORTHO05D018440 8.9e-07 57.0 92 32.6
Thhalv10021830m.g Eutrema salsugineum HOM05D010364 ORTHO05D012454 1.5e-06 56.2 89 31.5
C05p47910 Brassica napus HOM05D011909 ORTHO05D014045 2.0e-06 55.8 89 36.0
AL7G31580 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 3.4e-06 55.1 94 35.1
A01p13430 Brassica napus HOM05D009869 ORTHO05D011947 3.4e-06 55.1 95 35.8
CARHR228930 Cardamine hirsuta HOM05D009869 ORTHO05D011947 7.5e-06 53.9 94 36.2
Carub.0003s1791 Capsella rubella HOM05D011909 ORTHO05D014045 9.8e-06 53.5 92 34.8


User provided reference genes

Program Settings