Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 2.7e-157 558.5 261 100.0
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 1.6e-154 549.3 259 97.7
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 9.8e-152 540.0 258 96.5
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 5.8e-144 514.2 259 93.1
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 1.3e-143 513.1 258 92.2
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 5.4e-142 507.7 256 91.0
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 3.9e-140 501.5 254 90.2
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 1.2e-138 496.5 261 88.5
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 4.9e-135 484.6 244 90.2
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 1.9e-134 482.6 256 85.9
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 1.2e-133 479.9 256 85.5
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 2.1e-133 479.2 256 85.5
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 2.1e-133 479.2 256 85.5
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 5.1e-132 474.6 256 84.4
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 6.6e-132 474.2 256 86.3
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 1.5e-131 473.0 256 83.6
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 1.5e-131 473.0 254 85.8
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 1.9e-131 472.6 256 86.3
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 4.3e-131 471.5 258 82.6
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 7.3e-131 470.7 258 84.1
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 2.1e-130 469.2 243 87.7
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 2.8e-130 468.8 256 85.9
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 2.8e-130 468.8 256 85.9
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 3.6e-130 468.4 256 83.2
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 6.2e-130 467.6 256 82.4
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 1.4e-129 466.5 256 81.6
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 1.8e-129 466.1 253 84.2
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 4.0e-129 464.9 254 81.9
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 6.8e-129 464.2 257 81.3
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 8.9e-129 463.8 257 82.5
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 1.5e-128 463.0 253 82.6
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 2.0e-128 462.6 264 80.3
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 2.0e-128 462.6 258 81.4
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 3.4e-128 461.8 255 81.6
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 3.4e-128 461.8 255 82.7
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 7.6e-128 460.7 258 82.6
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 7.6e-128 460.7 243 84.0
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 7.6e-128 460.7 254 81.1
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 1.3e-127 459.9 261 81.2
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 1.7e-127 459.5 257 81.3
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 2.2e-127 459.1 256 81.6
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.9e-127 458.8 241 84.2
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 2.9e-127 458.8 253 81.8
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 2.9e-127 458.8 254 82.3
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 3.7e-127 458.4 254 81.5
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 8.4e-127 457.2 241 83.8
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 1.1e-126 456.8 261 80.8
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 1.4e-126 456.4 255 80.8
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 1.4e-126 456.4 241 83.8
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 2.4e-126 455.7 259 79.5
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 4.1e-126 454.9 253 81.8
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 9.2e-126 453.8 256 80.5
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 9.2e-126 453.8 236 85.6
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 1.6e-125 453.0 256 77.7
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 2.7e-125 452.2 253 80.6
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 3.5e-125 451.8 245 82.9
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 3.5e-125 451.8 244 81.6
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 1.3e-124 449.9 252 80.6
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 1.3e-124 449.9 251 79.7
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 1.3e-124 449.9 253 79.4
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 1.3e-124 449.9 264 78.4
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 6.6e-124 447.6 255 79.2
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 6.6e-124 447.6 255 79.2
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 8.6e-124 447.2 255 79.2
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.5e-123 446.4 254 78.0
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 9.6e-123 443.7 251 78.9
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 3.6e-122 441.8 238 81.9
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 1.4e-121 439.9 241 79.7
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 6.8e-121 437.6 256 75.8
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.2e-120 436.8 253 75.5
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 1.2e-120 436.8 253 76.7
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 1.5e-120 436.4 253 76.3
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.5e-120 436.4 250 78.8
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 2.0e-120 436.0 236 79.2
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.0e-120 436.0 250 78.8
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 2.0e-120 436.0 240 78.8
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 2.6e-120 435.6 253 76.7
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 3.4e-120 435.3 231 83.1
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 5.8e-120 434.5 246 76.8
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 5.8e-120 434.5 246 79.7
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 5.8e-120 434.5 250 78.4
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 5.8e-120 434.5 253 76.7
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 7.6e-120 434.1 256 77.0
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 9.9e-120 433.7 252 76.6
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 1.7e-119 433.0 256 74.6
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.2e-119 432.6 232 82.3
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 2.2e-119 432.6 253 75.9
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 2.2e-119 432.6 249 75.5
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 2.9e-119 432.2 253 76.3
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 3.8e-119 431.8 249 76.7
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 4.9e-119 431.4 246 78.5
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 6.4e-119 431.0 239 77.8
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 8.4e-119 430.6 245 76.7
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 8.4e-119 430.6 261 75.5
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 1.1e-118 430.3 245 77.1
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 3.2e-118 428.7 253 74.7
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 5.4e-118 427.9 235 79.1
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 7.1e-118 427.6 232 80.6
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 7.1e-118 427.6 251 74.5
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 7.1e-118 427.6 266 73.3
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 9.3e-118 427.2 249 75.1
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 1.2e-117 426.8 248 75.8
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 1.6e-117 426.4 233 79.4
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.1e-117 426.0 250 76.0
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 2.1e-117 426.0 252 75.8
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 2.1e-117 426.0 253 74.3
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 2.1e-117 426.0 247 75.7
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 4.6e-117 424.9 259 72.6
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 4.6e-117 424.9 252 73.4
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 4.6e-117 424.9 238 77.3
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 6.0e-117 424.5 240 78.3
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 7.8e-117 424.1 254 72.8
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 7.8e-117 424.1 256 72.7
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 1.3e-116 423.3 236 79.7
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 2.3e-116 422.5 253 75.1
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 3.0e-116 422.2 249 75.1
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 5.1e-116 421.4 242 75.6
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 6.6e-116 421.0 246 76.0
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 6.6e-116 421.0 243 75.7
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 8.7e-116 420.6 253 73.5
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 1.1e-115 420.2 243 74.1
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 1.5e-115 419.9 253 73.9
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 2.5e-115 419.1 252 73.0
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 4.3e-115 418.3 249 73.5
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 5.6e-115 417.9 252 71.8
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 7.3e-115 417.5 251 74.1
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.6e-114 416.4 244 75.0
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 3.6e-114 415.2 253 72.3
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 3.6e-114 415.2 253 72.7
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 3.6e-114 415.2 253 73.1
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 8.1e-114 414.1 241 75.5
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 1.1e-113 413.7 255 71.0
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 2.0e-112 409.5 228 78.5
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 2.6e-112 409.1 251 74.5
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 9.9e-112 407.1 226 78.3
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 5.4e-110 401.4 235 77.4
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 9.3e-110 400.6 241 71.4
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.3e-106 390.2 226 75.2
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 2.8e-106 389.0 245 69.4
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 4.8e-106 388.3 211 83.9
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 6.2e-106 387.9 230 74.3
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.3e-103 380.2 229 71.6
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 1.0e-100 370.5 250 66.8
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 4.0e-97 358.6 233 66.1
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 3.4e-96 355.5 243 64.2
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 1.0e-95 354.0 241 66.0
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 3.2e-94 349.0 248 63.3
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 5.5e-94 348.2 223 68.2
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 3.5e-93 345.5 257 62.6
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 4.6e-93 345.1 226 65.9
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 1.5e-91 340.1 237 61.2
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 3.9e-84 315.5 254 59.1
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 2.2e-82 309.7 182 78.6
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 1.4e-78 297.0 160 80.6
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 4.6e-77 292.0 156 80.1
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 3.6e-61 239.2 178 60.1
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 4.5e-56 222.2 250 46.8
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 3.8e-55 219.2 218 49.1
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 2.9e-47 193.0 209 48.3
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 3.5e-40 169.5 96 79.2
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 5.9e-32 142.1 107 64.5
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 6.2e-29 132.1 116 55.2
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 1.1e-25 121.3 141 46.8
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 4.7e-13 79.3 51 60.8
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 8.9e-12 75.1 64 54.7


User provided reference genes

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