Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 8.3e-79 297.0 150 100.0
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 8.3e-79 297.0 150 100.0
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.3e-75 284.6 150 96.7
AL6G38570 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-64 250.0 155 87.7
AL4G18700 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 6.9e-33 144.4 84 92.9
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 7.1e-30 134.4 163 42.3
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 2.7e-21 105.9 141 44.0
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.3e-20 102.8 152 43.4
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 8.7e-20 100.9 151 40.4
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 1.1e-19 100.5 131 43.5
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-19 100.5 151 38.4
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 1.9e-19 99.8 148 41.2
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.9e-19 99.8 141 44.0
CARHR284710 Cardamine hirsuta HOM05D007693 ORTHO05D002086 2.5e-19 99.4 138 41.3
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.5e-19 99.4 139 42.4
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 3.3e-19 99.0 141 43.3
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 3.3e-19 99.0 88 52.3
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.3e-19 98.6 121 43.0
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 5.7e-19 98.2 142 41.5
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 5.7e-19 98.2 142 41.5
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 7.4e-19 97.8 87 52.9
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 9.7e-19 97.4 138 40.6
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 9.7e-19 97.4 136 42.6
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-18 96.7 151 38.4
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 2.2e-18 96.3 79 53.2
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.8e-18 95.9 143 42.7
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.8e-18 95.9 141 40.4
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-18 95.5 147 38.8
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.7e-18 95.5 119 44.5
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 4.8e-18 95.1 161 40.4
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 8.2e-18 94.4 142 43.0
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.4e-17 92.8 140 37.9
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.4e-17 92.8 140 37.9
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 2.4e-17 92.8 100 44.0
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-17 92.8 129 44.2
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 6.9e-17 91.3 83 51.8
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 6.9e-17 91.3 83 51.8
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 9.0e-17 90.9 133 38.3
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 1.2e-16 90.5 151 37.1
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-16 90.1 89 50.6
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 2.6e-16 89.4 72 62.5
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 2.6e-16 89.4 83 50.6
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 4.5e-16 88.6 125 39.2
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 4.5e-16 88.6 75 58.7
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 5.9e-16 88.2 161 38.5
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 1.7e-15 86.7 76 56.6
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-15 86.3 134 37.3
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-15 86.3 72 58.3
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-15 86.3 110 43.6
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.2e-15 86.3 102 48.0
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 2.9e-15 85.9 95 45.3
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 3.8e-15 85.5 72 58.3
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 5.0e-15 85.1 71 57.7
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 6.5e-15 84.7 95 50.5
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.5e-15 84.7 159 38.4
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 8.5e-15 84.3 151 36.4
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 2.5e-14 82.8 142 35.9
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.5e-14 82.8 79 49.4
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 3.2e-14 82.4 133 37.6
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.2e-14 82.4 107 42.1
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 5.5e-14 81.6 67 53.7
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.5e-14 81.6 119 42.0
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 9.3e-14 80.9 137 36.5
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 1.2e-13 80.5 90 47.8
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.1e-13 79.7 107 42.1
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-13 79.0 142 40.1
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-13 79.0 142 40.1
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 3.6e-13 79.0 58 58.6
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 7.9e-13 77.8 137 34.3
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 1.0e-12 77.4 133 35.3
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 1.8e-12 76.6 106 41.5
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.8e-12 76.6 56 57.1
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 2.3e-12 76.3 152 33.6
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 3.0e-12 75.9 72 51.4
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 5.1e-12 75.1 116 36.2
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 8.8e-12 74.3 87 41.4
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-11 73.6 106 39.6
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 1.5e-11 73.6 90 46.7
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.5e-11 72.8 75 46.7
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 3.3e-11 72.4 149 33.6
Thhalv10022239m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.3e-11 72.4 122 41.8
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 4.3e-11 72.0 144 33.3
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 5.7e-11 71.6 147 32.0
BraA08t34216Z Brassica rapa HOM05D007693 ORTHO05D002086 7.4e-11 71.2 56 60.7
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 2.8e-10 69.3 130 33.1
BcaB08g35719 Brassica carinata HOM05D007693 ORTHO05D002086 4.8e-10 68.6 85 42.4
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 6.3e-10 68.2 79 39.2
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 8.2e-10 67.8 137 33.6
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 8.2e-10 67.8 137 33.6
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 8.2e-10 67.8 79 39.2
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 1.1e-09 67.4 76 42.1
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 1.4e-09 67.0 150 31.3
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 1.4e-09 67.0 76 42.1
BcaB03g16439 Brassica carinata HOM05D007462 ORTHO05D011074 1.8e-09 66.6 118 33.9
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-09 66.6 102 36.3
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-09 66.6 72 43.1
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 2.4e-09 66.2 128 32.0
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 2.4e-09 66.2 128 32.0
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 2.4e-09 66.2 147 34.7
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 2.4e-09 66.2 53 58.5
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 3.1e-09 65.9 133 32.3
BolC9t55840H Brassica oleracea HOM05D007693 ORTHO05D002086 3.1e-09 65.9 48 60.4
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 4.1e-09 65.5 133 32.3
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 4.1e-09 65.5 133 32.3
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 4.1e-09 65.5 133 32.3
BcaB02g11355 Brassica carinata HOM05D007462 ORTHO05D002086 5.3e-09 65.1 78 37.2
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 5.3e-09 65.1 69 44.9
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 5.3e-09 65.1 69 44.9
SpUn1120_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 5.3e-09 65.1 128 29.7
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 9.1e-09 64.3 101 38.6
BcaC06g36027 Brassica carinata HOM05D007462 ORTHO05D002086 9.1e-09 64.3 69 43.5
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-08 63.9 151 33.8
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 1.2e-08 63.9 76 40.8
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-08 63.5 76 40.8
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 1.5e-08 63.5 76 40.8
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.5e-08 63.5 81 42.0
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 1.5e-08 63.5 75 40.0
BcaC02g11886 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-08 63.2 76 40.8
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 2.0e-08 63.2 131 30.5
BcaC05g28128 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-08 63.2 80 37.5
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 2.0e-08 63.2 130 31.5
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 3.4e-08 62.4 69 42.0
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 3.4e-08 62.4 120 30.8
BraA07t28690Z Brassica rapa HOM05D007462 ORTHO05D002086 3.4e-08 62.4 73 37.0
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 5.9e-08 61.6 129 32.6
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 5.9e-08 61.6 133 30.1
BcaC04g21573 Brassica carinata HOM05D007462 ORTHO05D002086 7.7e-08 61.2 80 37.5
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 7.7e-08 61.2 111 33.3
BcaC06g36483 Brassica carinata HOM05D007462 ORTHO05D002086 1.0e-07 60.8 69 42.0
THA.LOC104806974 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.3e-07 60.5 156 32.7
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 1.7e-07 60.1 136 29.4
Sp6g09820 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.7e-07 60.1 65 47.7
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.7e-07 60.1 94 36.2
BolC7t43826H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-07 59.7 133 29.3
BolC8t49444H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-07 59.7 116 30.2
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-07 59.3 117 29.9
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 3.8e-07 58.9 78 38.5
C06p13560 Brassica napus HOM05D000675 ORTHO05D032734 6.5e-07 58.2 114 29.8
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 8.5e-07 57.8 129 34.1
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 8.5e-07 57.8 129 31.8
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 8.5e-07 57.8 105 34.3
BolC2t11199H Brassica oleracea HOM05D000589 ORTHO05D001885 8.5e-07 57.8 117 29.9
BcaC04g21270 Brassica carinata HOM05D007462 ORTHO05D002086 1.1e-06 57.4 78 35.9
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 57.4 95 32.6
Carub.0003s2743 Capsella rubella HOM05D000675 ORTHO05D002086 1.1e-06 57.4 101 34.7
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-06 57.0 72 37.5
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-06 57.0 81 38.3
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-06 57.0 81 38.3
BolC8t46873H Brassica oleracea HOM05D000675 ORTHO05D002086 1.4e-06 57.0 135 28.1
BolC8t48748H Brassica oleracea HOM05D007462 ORTHO05D002086 1.4e-06 57.0 81 37.0
BraA03t15123Z Brassica rapa HOM05D000675 ORTHO05D002086 1.4e-06 57.0 135 28.9
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-06 56.6 111 33.3
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.6 128 28.1
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 1.9e-06 56.6 118 34.7
BcaNung03744 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-06 56.6 96 35.4
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 1.9e-06 56.6 79 38.0
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 2.5e-06 56.2 105 34.3
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-06 56.2 53 41.5
BcaC08g42872 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-06 56.2 129 33.3
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 2.5e-06 56.2 104 31.7
BolC4t28282H Brassica oleracea HOM05D007693 ORTHO05D002086 2.5e-06 56.2 136 30.1
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 2.5e-06 56.2 129 31.0
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 2.5e-06 56.2 130 30.0
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 2.5e-06 56.2 119 32.8
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 3.2e-06 55.8 80 37.5
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-06 55.8 80 35.0
BcaC08g43955 Brassica carinata HOM05D000675 ORTHO05D032734 4.2e-06 55.5 113 29.2
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 4.2e-06 55.5 129 31.0
C06p36600 Brassica napus HOM05D007693 ORTHO05D002086 4.2e-06 55.5 104 34.6
BolC6t36520H Brassica oleracea HOM05D000675 ORTHO05D032734 4.2e-06 55.5 113 29.2
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 5.5e-06 55.1 118 34.7
AL2G19110 Arabidopsis lyrata HOM05D000589 ORTHO05D001885 7.2e-06 54.7 116 33.6
BcaC09g48825 Brassica carinata HOM05D000675 ORTHO05D002086 7.2e-06 54.7 109 30.3
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 7.2e-06 54.7 128 32.8
C01p45540 Brassica napus HOM05D000675 ORTHO05D002086 7.2e-06 54.7 109 30.3
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 7.2e-06 54.7 103 30.1
CARHR148640 Cardamine hirsuta HOM05D000675 ORTHO05D002086 7.2e-06 54.7 91 36.3
SpUn0001_0520 Schrenkiella parvula HOM05D017451 ORTHO05D019359 7.2e-06 54.7 54 44.4
BcaB04g18535 Brassica carinata HOM05D000675 ORTHO05D002086 9.4e-06 54.3 72 38.9
BolC4t23471H Brassica oleracea HOM05D007462 ORTHO05D002086 9.4e-06 54.3 67 40.3
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 9.4e-06 54.3 72 34.7


User provided reference genes

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