Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.3e-46 188.0 92 100.0
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.9e-43 177.2 92 92.4
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.6e-38 161.8 92 81.5
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.7e-38 160.6 92 82.6
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.4e-28 128.6 89 73.0
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.4e-28 128.6 92 70.7
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 9.1e-28 126.7 92 70.7
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.0e-27 125.6 84 73.8
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.9e-27 124.0 89 69.7
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.2e-26 122.1 92 67.4
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.2e-26 122.1 92 67.4
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 9.8e-22 106.7 91 56.0
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 4.8e-21 104.4 90 60.0
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-20 103.2 53 86.8
AT1G54775 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-17 92.4 60 78.3
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.7e-16 87.8 89 56.2
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.4e-14 81.6 81 50.6
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.7e-13 79.3 79 53.2
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 1.7e-13 79.3 79 50.6
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 1.7e-13 79.3 79 50.6
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.7e-13 78.2 98 45.9
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 6.3e-13 77.4 93 45.2
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 1.1e-12 76.6 91 39.6
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 1.1e-12 76.6 91 39.6
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 2.4e-12 75.5 79 49.4
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 2.4e-12 75.5 79 49.4
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 2.4e-12 75.5 79 49.4
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 2.4e-12 75.5 79 49.4
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.4e-12 75.5 75 52.0
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.1e-12 75.1 93 44.1
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.1e-12 74.7 89 43.8
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.1e-12 74.7 66 60.6
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 7.0e-12 73.9 98 43.9
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.0e-12 73.9 79 49.4
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 7.0e-12 73.9 79 48.1
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 7.0e-12 73.9 79 48.1
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 7.0e-12 73.9 93 46.2
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 9.2e-12 73.6 82 47.6
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 9.2e-12 73.6 79 49.4
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-11 73.2 70 47.1
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-11 73.2 70 47.1
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-11 73.2 70 47.1
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.2e-11 73.2 70 47.1
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 1.6e-11 72.8 79 49.4
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.6e-11 72.8 82 51.2
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 2.0e-11 72.4 67 44.8
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.7e-11 72.0 81 49.4
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.5e-11 71.6 92 44.6
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 4.5e-11 71.2 79 48.1
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.9e-11 70.9 87 41.4
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.9e-11 70.9 87 41.4
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 5.9e-11 70.9 69 50.7
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 7.8e-11 70.5 87 41.4
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-10 70.1 70 45.7
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-10 70.1 70 45.7
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-10 70.1 70 45.7
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-10 70.1 70 45.7
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-10 70.1 70 45.7
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-10 70.1 70 45.7
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 1.0e-10 70.1 82 45.1
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 2.9e-10 68.6 79 48.1
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 2.9e-10 68.6 82 47.6
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.8e-10 68.2 67 44.8
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.8e-10 68.2 67 44.8
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 3.8e-10 68.2 92 39.1
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.0e-10 67.8 79 44.3
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 5.0e-10 67.8 70 45.7
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 6.6e-10 67.4 91 42.9
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 6.6e-10 67.4 91 42.9
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 6.6e-10 67.4 96 41.7
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 8.6e-10 67.0 60 48.3
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.1e-09 66.6 79 44.3
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-09 65.9 79 43.0
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.9e-09 65.9 70 44.3
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 1.9e-09 65.9 91 41.8
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.6e-09 64.3 63 50.8
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 9.5e-09 63.5 63 47.6
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 1.2e-08 63.2 82 47.6
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.2e-08 63.2 75 45.3
BraA10t42559Z Brassica rapa HOM05D006717 ORTHO05D008139 1.6e-08 62.8 91 40.7
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.1e-08 62.4 70 40.0
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 2.1e-08 62.4 83 42.2
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 2.8e-08 62.0 82 45.1
THA.LOC104800186 Tarenaya hassleriana HOM05D006717 ORTHO05D008139 2.8e-08 62.0 92 42.4
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 3.6e-08 61.6 78 38.5
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 3.6e-08 61.6 94 42.6
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 3.6e-08 61.6 89 42.7
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 6.1e-08 60.8 65 44.6
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 6.1e-08 60.8 65 44.6
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 8.0e-08 60.5 66 50.0
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 8.0e-08 60.5 65 44.6
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 8.0e-08 60.5 66 50.0
Thhalv10009471m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.0e-07 60.1 67 46.3
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.8e-07 59.3 83 39.8
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 2.3e-07 58.9 67 43.3
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.3e-07 58.9 66 45.5
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.0e-07 58.5 65 50.8
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 5.2e-07 57.8 62 45.2
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 2.6e-06 55.5 55 40.0
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 2.6e-06 55.5 55 40.0
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.4e-06 55.1 66 48.5
A09p33010 Brassica napus HOM05D006717 ORTHO05D008139 4.4e-06 54.7 58 48.3


User provided reference genes

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