Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G17090 Arabidopsis lyrata HOM05D000011 ORTHO05D080205 4.4e-80 301.2 151 100.0
Thhalv10023861m.g Eutrema salsugineum HOM05D000011 ORTHO05D000018 2.0e-16 89.7 122 45.9
C03p55950 Brassica napus HOM05D000011 ORTHO05D000018 2.2e-15 86.3 121 45.5
BolC3t17879H Brassica oleracea HOM05D000011 ORTHO05D000018 2.2e-15 86.3 121 45.5
Carub.0002s0550 Capsella rubella HOM05D000011 ORTHO05D000018 6.5e-15 84.7 121 44.6
BraA03t13644Z Brassica rapa HOM05D000011 ORTHO05D000018 1.9e-14 83.2 121 44.6
A03p45100 Brassica napus HOM05D000011 ORTHO05D000018 2.5e-14 82.8 121 44.6
BcaB08g34547 Brassica carinata HOM05D000011 ORTHO05D000018 6.1e-13 78.2 120 42.5
CARHR053290 Cardamine hirsuta HOM05D000011 ORTHO05D000018 6.1e-13 78.2 118 43.2
CARHR035560 Cardamine hirsuta HOM05D000011 ORTHO05D000018 1.0e-12 77.4 122 43.4
AL2G17420 Arabidopsis lyrata HOM05D000011 ORTHO05D000018 5.2e-12 75.1 120 41.7
Carub.0002s0582 Capsella rubella HOM05D000011 ORTHO05D000018 2.6e-11 72.8 119 40.3
Aa31LG11G11570 Aethionema arabicum HOM05D000011 ORTHO05D000018 3.3e-11 72.4 126 38.9
CARHR283760 Cardamine hirsuta HOM05D000011 ORTHO05D000018 2.2e-10 69.7 116 40.5
BcaC06g31794 Brassica carinata HOM05D000011 ORTHO05D000018 3.7e-10 68.9 118 39.8
Aa31LG2G11620 Aethionema arabicum HOM05D000011 ORTHO05D000018 8.2e-10 67.8 125 38.4
Aa31LG2G10700 Aethionema arabicum HOM05D000011 ORTHO05D000018 1.4e-09 67.0 122 41.8
CARHR283710 Cardamine hirsuta HOM05D000011 ORTHO05D000018 1.4e-09 67.0 115 40.0
C04p26300 Brassica napus HOM05D000011 ORTHO05D000018 2.4e-09 66.2 118 39.0
BolC4t24177H Brassica oleracea HOM05D000011 ORTHO05D000018 2.4e-09 66.2 118 39.0
CARHR058170 Cardamine hirsuta HOM05D000011 ORTHO05D000018 2.4e-09 66.2 121 36.4
CARHR053510 Cardamine hirsuta HOM05D000011 ORTHO05D000018 3.1e-09 65.9 120 38.3
Carub.0002s0613 Capsella rubella HOM05D000011 ORTHO05D000018 4.1e-09 65.5 125 36.8
Thhalv10024072m.g Eutrema salsugineum HOM05D000011 ORTHO05D000018 4.1e-09 65.5 83 50.6
AL2G17430 Arabidopsis lyrata HOM05D000011 ORTHO05D000018 7.0e-09 64.7 120 39.2
A09p17890 Brassica napus HOM05D000011 ORTHO05D000018 9.1e-09 64.3 122 38.5
Carub.0002s0575 Capsella rubella HOM05D000011 ORTHO05D000018 9.1e-09 64.3 120 36.7
CARHR284070 Cardamine hirsuta HOM05D000011 ORTHO05D000018 9.1e-09 64.3 121 36.4
Aa31LG2G11960 Aethionema arabicum HOM05D000011 ORTHO05D000018 1.2e-08 63.9 137 34.3
Aa31LG2G12060 Aethionema arabicum HOM05D000011 ORTHO05D000018 1.2e-08 63.9 91 45.1
Carub.0002s0583 Capsella rubella HOM05D000011 ORTHO05D000018 1.2e-08 63.9 121 36.4
Sp2g04950 Schrenkiella parvula HOM05D000011 ORTHO05D000018 1.2e-08 63.9 122 38.5
Aa31LG2G12020 Aethionema arabicum HOM05D000011 ORTHO05D000018 2.0e-08 63.2 122 36.1
BcaB04g20232 Brassica carinata HOM05D000011 ORTHO05D000018 2.0e-08 63.2 121 38.0
Carub.0002s0611 Capsella rubella HOM05D000011 ORTHO05D000018 2.0e-08 63.2 133 36.1
Aa31LG2G11640 Aethionema arabicum HOM05D000011 ORTHO05D000018 2.7e-08 62.8 133 34.6
AT1G58807 Arabidopsis thaliana HOM05D000011 ORTHO05D000018 2.7e-08 62.8 130 34.6
AT1G59124 Arabidopsis thaliana HOM05D000011 ORTHO05D000018 2.7e-08 62.8 130 34.6
Sp2g04960 Schrenkiella parvula HOM05D000011 ORTHO05D000018 2.7e-08 62.8 122 37.7
Aa31LG2G11980 Aethionema arabicum HOM05D000011 ORTHO05D000018 3.5e-08 62.4 120 36.7
AL1G65650 Arabidopsis lyrata HOM05D000011 ORTHO05D000018 3.5e-08 62.4 125 36.8
AL2G17830 Arabidopsis lyrata HOM05D000011 ORTHO05D000018 3.5e-08 62.4 124 35.5
AT1G58390 Arabidopsis thaliana HOM05D000011 ORTHO05D000018 3.5e-08 62.4 127 34.6
AT1G58848 Arabidopsis thaliana HOM05D000011 ORTHO05D000018 4.5e-08 62.0 130 34.6
AT1G59218 Arabidopsis thaliana HOM05D000011 ORTHO05D000018 4.5e-08 62.0 130 34.6
Carub.0002s0598 Capsella rubella HOM05D000011 ORTHO05D000018 4.5e-08 62.0 125 35.2
Aa31LG2G12050 Aethionema arabicum HOM05D000011 ORTHO05D000018 5.9e-08 61.6 118 37.3
BcaC09g49457 Brassica carinata HOM05D000011 ORTHO05D000018 5.9e-08 61.6 122 37.7
C01p36500 Brassica napus HOM05D000011 ORTHO05D000018 5.9e-08 61.6 122 37.7
BolC1t03611H Brassica oleracea HOM05D000011 ORTHO05D000018 5.9e-08 61.6 122 37.7
CARHR283730 Cardamine hirsuta HOM05D000011 ORTHO05D000018 5.9e-08 61.6 140 35.0
AL2G17260 Arabidopsis lyrata HOM05D000011 ORTHO05D011295 7.7e-08 61.2 122 36.9
AL2G17810 Arabidopsis lyrata HOM05D000011 ORTHO05D000018 1.0e-07 60.8 121 34.7
A01p28850 Brassica napus HOM05D000011 ORTHO05D000018 1.0e-07 60.8 122 37.7
BraA09t37432Z Brassica rapa HOM05D000011 ORTHO05D000018 1.0e-07 60.8 120 38.3
CARHR283910 Cardamine hirsuta HOM05D000011 ORTHO05D000018 1.0e-07 60.8 124 34.7
AL2G17250 Arabidopsis lyrata HOM05D000011 ORTHO05D000018 1.3e-07 60.5 118 34.7
Aa31LG2G11920 Aethionema arabicum HOM05D000011 ORTHO05D000018 1.7e-07 60.1 124 35.5
Thhalv10023235m.g Eutrema salsugineum HOM05D000011 ORTHO05D000018 1.7e-07 60.1 123 34.1
BolC3t17752H Brassica oleracea HOM05D000011 ORTHO05D000018 2.9e-07 59.3 92 42.4
AT1G58400 Arabidopsis thaliana HOM05D000011 ORTHO05D000018 3.8e-07 58.9 121 35.5
AL2G17390 Arabidopsis lyrata HOM05D000011 ORTHO05D000018 5.0e-07 58.5 121 34.7
C09p22410 Brassica napus HOM05D000011 ORTHO05D000018 5.0e-07 58.5 120 37.5
BolC9t55159H Brassica oleracea HOM05D000011 ORTHO05D000018 5.0e-07 58.5 120 37.5
Carub.0002s0573 Capsella rubella HOM05D000011 ORTHO05D000018 1.1e-06 57.4 118 34.7
CARHR011140 Cardamine hirsuta HOM05D000011 ORTHO05D000018 1.1e-06 57.4 120 37.5
CARHR284130 Cardamine hirsuta HOM05D000011 ORTHO05D000018 1.1e-06 57.4 123 35.0
BcaB07g31172 Brassica carinata HOM05D000011 ORTHO05D000018 1.5e-06 57.0 121 34.7
BcaB07g31186 Brassica carinata HOM05D000011 ORTHO05D000018 1.5e-06 57.0 119 36.1
C03p54670 Brassica napus HOM05D000011 ORTHO05D000018 1.5e-06 57.0 92 41.3
Sp6g22630 Schrenkiella parvula HOM05D000011 ORTHO05D000018 1.9e-06 56.6 125 32.8
Aa31LG2G12070 Aethionema arabicum HOM05D000011 ORTHO05D000018 3.2e-06 55.8 135 32.6
AT1G58602 Arabidopsis thaliana HOM05D000011 ORTHO05D000018 3.2e-06 55.8 126 34.9
A10p18210 Brassica napus HOM05D000011 ORTHO05D000018 3.2e-06 55.8 118 34.7
CARHR053540 Cardamine hirsuta HOM05D000011 ORTHO05D000018 3.2e-06 55.8 121 34.7
Aa31LG2G11780 Aethionema arabicum HOM05D000011 ORTHO05D000018 4.2e-06 55.5 124 33.9
A02p40420 Brassica napus HOM05D000011 ORTHO05D000018 4.2e-06 55.5 122 34.4
CARHR123300 Cardamine hirsuta HOM05D000011 ORTHO05D000018 4.2e-06 55.5 125 32.8
BcaB07g29985 Brassica carinata HOM05D000011 ORTHO05D000018 5.5e-06 55.1 120 33.3
CARHR053930 Cardamine hirsuta HOM05D000011 ORTHO05D000018 7.2e-06 54.7 48 58.3


User provided reference genes

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