Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G16410 Arabidopsis lyrata HOM05D007901 ORTHO05D012782 5.3e-101 370.9 175 100.0
AT1G60240 Arabidopsis thaliana HOM05D007901 ORTHO05D012782 5.3e-85 317.8 176 84.1
Carub.0002s0501 Capsella rubella HOM05D007901 ORTHO05D012782 4.2e-66 255.0 169 70.4
Thhalv10023723m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 4.1e-61 238.4 163 66.9
BcaB04g20274 Brassica carinata HOM05D007901 ORTHO05D012782 4.2e-58 228.4 171 63.2
BraA01t03070Z Brassica rapa HOM05D007901 ORTHO05D012782 6.1e-57 224.6 168 63.1
BolC1t03680H Brassica oleracea HOM05D007901 ORTHO05D012782 1.4e-56 223.4 168 62.5
BcaC09g49391 Brassica carinata HOM05D007901 ORTHO05D012782 1.8e-56 223.0 168 61.9
C01p37150 Brassica napus HOM05D007901 ORTHO05D012782 1.8e-56 223.0 168 61.9
CARHR052720 Cardamine hirsuta HOM05D007901 ORTHO05D012782 2.5e-42 176.0 178 51.1
CARHR052710 Cardamine hirsuta HOM05D007901 ORTHO05D012782 3.3e-42 175.6 175 50.9
AL2G16330 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 4.4e-31 138.7 160 45.0
BcaB04g20260 Brassica carinata HOM05D007901 ORTHO05D016734 4.4e-31 138.7 158 44.9
Thhalv10024006m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 4.4e-31 138.7 168 47.6
AL2G16550 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 9.8e-31 137.5 161 44.7
Carub.0002s0498 Capsella rubella HOM05D007901 ORTHO05D010902 1.3e-30 137.1 159 45.3
AT1G60280 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 2.9e-30 136.0 159 44.7
AT1G60300 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 3.7e-30 135.6 162 43.2
AT1G60350 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 4.9e-30 135.2 170 41.8
Thhalv10023876m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 4.9e-30 135.2 165 44.2
AT1G60340 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 6.4e-30 134.8 169 42.6
AL2G16320 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.9e-29 133.3 161 44.1
AL2G16360 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 3.2e-29 132.5 171 42.1
A10p13190 Brassica napus HOM05D007901 ORTHO05D010902 3.2e-29 132.5 159 45.9
Carub.0002s0497 Capsella rubella HOM05D007901 ORTHO05D010902 3.2e-29 132.5 160 43.8
AT1G60380 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 4.1e-29 132.1 160 43.8
BcaC04g20143 Brassica carinata HOM05D007901 ORTHO05D010902 5.4e-29 131.7 159 45.3
BcaC06g31809 Brassica carinata HOM05D007901 ORTHO05D016734 9.2e-29 131.0 159 43.4
A10p13180 Brassica napus HOM05D007901 ORTHO05D010902 9.2e-29 131.0 165 45.5
BraA10t43415Z Brassica rapa HOM05D007901 ORTHO05D010902 9.2e-29 131.0 165 45.5
BraA10t43416Z Brassica rapa HOM05D007901 ORTHO05D010902 9.2e-29 131.0 159 45.3
BcaC02g10635 Brassica carinata HOM05D007901 ORTHO05D016734 1.2e-28 130.6 152 45.4
C04p26040 Brassica napus HOM05D007901 ORTHO05D016734 1.2e-28 130.6 152 45.4
BolC4t24201H Brassica oleracea HOM05D007901 ORTHO05D016734 1.2e-28 130.6 152 45.4
BolC9t57581H Brassica oleracea HOM05D007901 ORTHO05D010902 1.2e-28 130.6 159 44.7
A10p13320 Brassica napus HOM05D007901 ORTHO05D010902 2.0e-28 129.8 159 45.3
C09p46950 Brassica napus HOM05D007901 ORTHO05D010902 6.0e-28 128.3 159 44.0
BraA10t43433Z Brassica rapa HOM05D007901 ORTHO05D010902 6.0e-28 128.3 159 44.7
A01p29180 Brassica napus HOM05D007901 ORTHO05D010902 1.3e-27 127.1 169 37.9
C09p47250 Brassica napus HOM05D007901 ORTHO05D010902 1.3e-27 127.1 160 44.4
Carub.0170s0002 Capsella rubella HOM05D007901 ORTHO05D010902 1.3e-27 127.1 157 42.7
Sp2g04430 Schrenkiella parvula HOM05D007901 ORTHO05D010902 1.3e-27 127.1 160 40.6
BraA09t38123Z Brassica rapa HOM05D007901 ORTHO05D016734 2.3e-27 126.3 163 44.2
BraA01t03004Z Brassica rapa HOM05D007901 ORTHO05D010902 3.0e-27 125.9 169 37.9
BcaC04g20178 Brassica carinata HOM05D007901 ORTHO05D010902 5.0e-27 125.2 159 43.4
BolC9t57543H Brassica oleracea HOM05D007901 ORTHO05D010902 1.9e-26 123.2 159 42.8
Carub.0170s0003 Capsella rubella HOM05D007901 ORTHO05D010902 1.9e-26 123.2 161 41.6
BcaC09g49444 Brassica carinata HOM05D007901 ORTHO05D010902 2.5e-26 122.9 169 37.3
BolC1t03653H Brassica oleracea HOM05D007901 ORTHO05D010902 2.5e-26 122.9 169 37.3
BraA01t02977Z Brassica rapa HOM05D007901 ORTHO05D010902 2.5e-26 122.9 153 41.2
CARHR052690 Cardamine hirsuta HOM05D007901 ORTHO05D016734 2.5e-26 122.9 163 40.5
AL2G16340 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 5.6e-26 121.7 154 42.2
C01p36710 Brassica napus HOM05D007901 ORTHO05D010902 7.3e-26 121.3 169 37.3
BolC1t03631H Brassica oleracea HOM05D007901 ORTHO05D010902 7.3e-26 121.3 169 37.3
BcaB08g35962 Brassica carinata HOM05D007901 ORTHO05D010902 1.6e-25 120.2 160 41.2
BcaB05g23805 Brassica carinata HOM05D007901 ORTHO05D016734 3.6e-25 119.0 157 41.4
BcaB01g01779 Brassica carinata HOM05D007901 ORTHO05D016734 6.2e-25 118.2 140 45.7
Carub.0002s0495 Capsella rubella HOM05D007901 ORTHO05D010902 6.2e-25 118.2 160 39.4
A09p25480 Brassica napus HOM05D007901 ORTHO05D016734 1.4e-24 117.1 176 40.9
CARHR052680 Cardamine hirsuta HOM05D007901 ORTHO05D010902 8.9e-24 114.4 166 39.2
Thhalv10024128m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 8.9e-24 114.4 159 45.3
BcaB04g20261 Brassica carinata HOM05D007901 ORTHO05D010902 1.2e-23 114.0 159 40.9
BcaC09g49416 Brassica carinata HOM05D007901 ORTHO05D010902 4.4e-23 112.1 143 39.9
Thhalv10023895m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 4.4e-23 112.1 136 44.9
Thhalv10024148m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 5.8e-23 111.7 165 41.2
BcaB04g20243 Brassica carinata HOM05D007901 ORTHO05D010902 1.7e-22 110.2 161 39.1
Thhalv10024149m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 2.9e-22 109.4 157 43.3
C01p36960 Brassica napus HOM05D007901 ORTHO05D010902 4.9e-22 108.6 137 40.9
A01p28980 Brassica napus HOM05D007901 ORTHO05D010902 5.4e-13 78.6 140 36.4
BcaC04g20179 Brassica carinata HOM05D007901 ORTHO05D012782 7.1e-13 78.2 95 48.4
Sp2g04350 Schrenkiella parvula HOM05D007901 ORTHO05D010902 8.9e-08 61.2 127 31.5
C05p51210 Brassica napus HOM05D021084 ORTHO05D012782 2.9e-06 56.2 58 44.8


User provided reference genes

Program Settings