Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 9.4e-84 313.5 164 100.0
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 5.9e-78 294.3 164 93.9
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 7.2e-76 287.3 165 91.5
Sp2g04000 Schrenkiella parvula HOM05D009121 ORTHO05D001888 2.9e-61 238.8 163 74.8
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 4.1e-55 218.4 155 72.9
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 4.5e-54 214.9 165 69.1
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 6.8e-50 201.1 168 63.7
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 7.5e-49 197.6 169 62.1
C09p21480 Brassica napus HOM05D009121 ORTHO05D001888 7.5e-49 197.6 163 62.0
BolC9t55053H Brassica oleracea HOM05D009121 ORTHO05D001888 7.5e-49 197.6 163 62.0
A09p17300 Brassica napus HOM05D009121 ORTHO05D001888 1.7e-48 196.4 163 61.3
BraA09t37359Z Brassica rapa HOM05D009121 ORTHO05D001888 1.7e-48 196.4 163 61.3
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 3.7e-48 195.3 169 61.5
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 3.7e-48 195.3 169 61.5
BcaNung05350 Brassica carinata HOM05D009121 ORTHO05D001888 8.3e-48 194.1 163 60.7
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 2.4e-47 192.6 169 61.5
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 2.4e-47 192.6 169 61.5
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 5.4e-47 191.4 168 60.7
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 9.2e-47 190.7 169 59.8
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 1.6e-46 189.9 167 62.3
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 2.0e-46 189.5 168 59.5
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 2.0e-46 189.5 169 59.2
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 3.5e-46 188.7 168 58.3
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 5.9e-46 188.0 169 58.6
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 5.9e-46 188.0 169 58.6
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 7.8e-46 187.6 166 59.0
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 1.3e-45 186.8 169 58.0
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 1.1e-44 183.7 169 57.4
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 2.5e-44 182.6 169 57.4
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.6e-43 179.9 167 56.9
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 2.1e-43 179.5 164 55.5
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 1.3e-37 160.2 167 55.1
Aa31LG1G4060 Aethionema arabicum HOM05D009121 ORTHO05D001888 1.9e-28 129.8 142 47.9
BolC8t49030H Brassica oleracea HOM05D009121 ORTHO05D001888 5.8e-17 91.7 94 55.3
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 8.7e-13 77.8 149 33.6
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 3.3e-12 75.9 158 32.3
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 5.6e-12 75.1 153 32.7
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 7.3e-12 74.7 164 30.5
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 9.6e-12 74.3 131 33.6
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 1.2e-11 73.9 163 31.9
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 1.6e-11 73.6 162 31.5
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 1.6e-11 73.6 162 31.5
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 1.6e-11 73.6 162 31.5
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 1.6e-11 73.6 132 35.6
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.6e-11 73.6 154 34.4
Thhalv10019249m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 3.6e-11 72.4 154 31.2
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 4.7e-11 72.0 158 35.4
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 4.7e-11 72.0 160 31.2
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 6.2e-11 71.6 162 32.1
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 6.2e-11 71.6 155 31.6
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 1.1e-10 70.9 165 33.9
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 1.1e-10 70.9 137 33.6
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 1.4e-10 70.5 162 31.5
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.4e-10 70.5 173 30.6
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 1.8e-10 70.1 170 30.0
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 1.8e-10 70.1 159 32.1
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 2.4e-10 69.7 157 34.4
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 3.1e-10 69.3 165 32.7
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 3.1e-10 69.3 152 30.9
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 5.2e-10 68.6 166 31.3
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 6.9e-10 68.2 162 29.6
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 2.0e-09 66.6 136 30.1
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 2.6e-09 66.2 153 30.1
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 5.8e-09 65.1 156 28.2
A02p16620 Brassica napus HOM05D008070 ORTHO05D001888 5.8e-09 65.1 130 29.2
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 5.8e-09 65.1 161 32.9
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 5.8e-09 65.1 156 28.2
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 5.8e-09 65.1 161 32.9
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 5.8e-09 65.1 158 31.0
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 7.6e-09 64.7 161 32.9
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 7.6e-09 64.7 156 28.2
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 7.6e-09 64.7 161 32.9
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 7.6e-09 64.7 161 32.9
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 7.6e-09 64.7 156 28.2
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 9.9e-09 64.3 134 31.3
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 9.9e-09 64.3 132 31.1
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 9.9e-09 64.3 165 30.9
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 1.3e-08 63.9 136 29.4
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 1.3e-08 63.9 133 30.8
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 1.3e-08 63.9 164 32.9
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 1.7e-08 63.5 136 28.7
Sp5g25690 Schrenkiella parvula HOM05D008070 ORTHO05D001888 1.7e-08 63.5 161 28.6
C08p13970 Brassica napus HOM05D009121 ORTHO05D001888 2.2e-08 63.2 64 56.2
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 2.2e-08 63.2 169 30.8
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 2.9e-08 62.8 135 29.6
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 3.8e-08 62.4 168 27.4
BcaC03g15202 Brassica carinata HOM05D008070 ORTHO05D001888 6.4e-08 61.6 161 26.7
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 6.4e-08 61.6 112 34.8
C02p27870 Brassica napus HOM05D008070 ORTHO05D001888 6.4e-08 61.6 161 26.7
BolC2t08833H Brassica oleracea HOM05D008070 ORTHO05D001888 6.4e-08 61.6 161 26.7
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 6.4e-08 61.6 163 25.8
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 1.1e-07 60.8 158 27.8
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 1.9e-07 60.1 125 32.8
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 1.9e-07 60.1 158 28.5
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 2.4e-07 59.7 140 28.6
Sed0024894 Sechium edule HOM05D008070 ORTHO05D001888 7.1e-07 58.2 149 28.2
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 7.1e-07 58.2 144 31.9
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 9.3e-07 57.8 155 27.7
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.2e-06 57.4 150 29.3
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 3.5e-06 55.8 152 28.3


User provided reference genes

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