Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G15510 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 8.3e-50 199.9 90 100.0
AL2G15522 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 8.3e-50 199.9 90 100.0
AT1G60983 Arabidopsis thaliana HOM05D009053 ORTHO05D014846 1.0e-47 193.0 90 96.7
Carub.0002s0427 Capsella rubella HOM05D009053 ORTHO05D014846 9.8e-43 176.4 87 85.1
CARHR052040 Cardamine hirsuta HOM05D009053 ORTHO05D014846 2.1e-37 158.7 88 78.4
BcaC02g10447 Brassica carinata HOM05D009053 ORTHO05D014846 2.0e-35 152.1 88 75.0
C04p28810 Brassica napus HOM05D009053 ORTHO05D014846 2.0e-35 152.1 88 75.0
BolC4t24415H Brassica oleracea HOM05D009053 ORTHO05D014846 2.0e-35 152.1 88 75.0
A03p68010 Brassica napus HOM05D009053 ORTHO05D014846 3.7e-34 147.9 84 75.0
BraA01t02672Z Brassica rapa HOM05D009053 ORTHO05D014846 3.7e-34 147.9 84 75.0
Thhalv10023863m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 3.0e-31 138.3 87 71.3
Sp2g03580 Schrenkiella parvula HOM05D009053 ORTHO05D014846 7.3e-30 133.7 90 68.9
Aa31LG2G9610 Aethionema arabicum HOM05D009053 ORTHO05D010698 7.8e-24 113.6 92 57.6
Thhalv10024151m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 1.7e-23 112.5 90 58.9
Thhalv10023986m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.2e-21 106.3 96 53.1
CARHR052060 Cardamine hirsuta HOM05D009053 ORTHO05D010698 3.6e-21 104.8 91 53.8
AT1G60986 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.0e-20 101.3 97 50.5
AL2G15500 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 6.8e-20 100.5 97 50.5
Carub.0002s0426 Capsella rubella HOM05D009053 ORTHO05D010698 2.0e-19 99.0 96 52.1
Sp2g03540 Schrenkiella parvula HOM05D009053 ORTHO05D010698 2.6e-19 98.6 96 49.0
A01p30500 Brassica napus HOM05D009053 ORTHO05D010698 2.2e-18 95.5 95 48.4
BraA01t03182Z Brassica rapa HOM05D009053 ORTHO05D010698 2.2e-18 95.5 95 48.4
Thhalv10023883m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 6.4e-18 94.0 97 47.4
A01p29760 Brassica napus HOM05D009053 ORTHO05D010698 1.1e-17 93.2 95 47.4
C01p37590 Brassica napus HOM05D009053 ORTHO05D010698 1.1e-17 93.2 95 47.4
BolC1t03725H Brassica oleracea HOM05D009053 ORTHO05D010698 1.1e-17 93.2 95 47.4
BraA01t03103Z Brassica rapa HOM05D009053 ORTHO05D010698 1.1e-17 93.2 95 47.4
BcaC09g49348 Brassica carinata HOM05D009053 ORTHO05D010698 2.4e-17 92.0 95 47.4
BcaB04g20305 Brassica carinata HOM05D009053 ORTHO05D010698 1.6e-16 89.4 95 45.3
Thhalv10024049m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 4.6e-16 87.8 131 38.2
AT1G60989 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 3.0e-15 85.1 91 47.3
BcaB04g20300 Brassica carinata HOM05D009053 ORTHO05D010698 3.0e-15 85.1 95 43.2
Carub.0002s0423 Capsella rubella HOM05D009053 ORTHO05D010698 5.1e-15 84.3 91 46.2
AL2G15490 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 1.1e-14 83.2 97 42.3
AT1G60987 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 1.1e-12 76.6 97 42.3
AT1G60985 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.0e-12 74.7 95 43.2
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 1.4e-09 66.2 98 41.8
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 5.4e-09 64.3 98 40.8
Carub.0007s2597 Capsella rubella HOM05D010807 ORTHO05D010698 7.1e-09 63.9 94 43.6
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 1.2e-08 63.2 91 40.7
AL7G39660 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 2.1e-08 62.4 93 44.1
AT4G15733 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 2.7e-08 62.0 93 43.0
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 6.0e-08 60.8 90 42.2
CARHR056520 Cardamine hirsuta HOM05D010807 ORTHO05D010698 1.7e-07 59.3 106 37.7
CARHR260120 Cardamine hirsuta HOM05D010807 ORTHO05D010698 3.0e-07 58.5 91 40.7
Thhalv10026885m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 3.9e-07 58.2 82 41.5
Thhalv10027327m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 1.1e-06 56.6 91 40.7
CARHR290170 Cardamine hirsuta HOM05D010807 ORTHO05D010698 1.9e-06 55.8 94 38.3
Carub.0007s2598 Capsella rubella HOM05D010807 ORTHO05D010698 4.3e-06 54.7 84 40.5
Thhalv10026975m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 4.3e-06 54.7 91 39.6


User provided reference genes

Program Settings