Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G15490 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 8.7e-53 209.9 98 100.0
AT1G60987 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 1.2e-38 162.9 98 76.5
AT1G60986 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 1.7e-35 152.5 98 73.5
AL2G15500 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 4.8e-35 151.0 98 72.4
Carub.0002s0426 Capsella rubella HOM05D009053 ORTHO05D010698 1.4e-29 132.9 98 67.3
Aa31LG2G9610 Aethionema arabicum HOM05D009053 ORTHO05D010698 1.1e-26 123.2 96 60.4
AT1G60985 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 1.1e-26 123.2 98 60.2
Thhalv10023986m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 7.0e-26 120.6 98 59.2
CARHR052060 Cardamine hirsuta HOM05D009053 ORTHO05D010698 2.5e-23 112.1 96 56.2
Sp2g03540 Schrenkiella parvula HOM05D009053 ORTHO05D010698 2.5e-23 112.1 98 54.1
BcaB04g20300 Brassica carinata HOM05D009053 ORTHO05D010698 3.2e-23 111.7 96 55.2
C01p37590 Brassica napus HOM05D009053 ORTHO05D010698 5.5e-23 110.9 96 54.2
BolC1t03725H Brassica oleracea HOM05D009053 ORTHO05D010698 5.5e-23 110.9 96 54.2
BcaC09g49348 Brassica carinata HOM05D009053 ORTHO05D010698 1.2e-22 109.8 96 54.2
A01p29760 Brassica napus HOM05D009053 ORTHO05D010698 1.2e-22 109.8 96 53.1
BraA01t03103Z Brassica rapa HOM05D009053 ORTHO05D010698 1.2e-22 109.8 96 53.1
A01p30500 Brassica napus HOM05D009053 ORTHO05D010698 4.7e-22 107.8 96 52.1
BraA01t03182Z Brassica rapa HOM05D009053 ORTHO05D010698 4.7e-22 107.8 96 52.1
Thhalv10023883m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 4.7e-22 107.8 99 53.5
Thhalv10024049m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.4e-21 106.3 133 45.9
BcaB04g20305 Brassica carinata HOM05D009053 ORTHO05D010698 8.8e-21 103.6 96 52.1
Carub.0002s0423 Capsella rubella HOM05D009053 ORTHO05D010698 5.7e-20 100.9 96 52.1
AT1G60989 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 1.3e-19 99.8 96 50.0
AL2G15510 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 9.4e-15 83.6 97 42.3
AL2G15522 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 9.4e-15 83.6 97 42.3
AT1G60983 Arabidopsis thaliana HOM05D009053 ORTHO05D014846 4.7e-14 81.3 97 41.2
Carub.0002s0427 Capsella rubella HOM05D009053 ORTHO05D014846 1.8e-13 79.3 97 40.2
Thhalv10023863m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 4.0e-13 78.2 97 41.2
CARHR052040 Cardamine hirsuta HOM05D009053 ORTHO05D014846 2.0e-12 75.9 97 40.2
BcaC02g10447 Brassica carinata HOM05D009053 ORTHO05D014846 3.4e-12 75.1 97 41.2
C04p28810 Brassica napus HOM05D009053 ORTHO05D014846 3.4e-12 75.1 97 41.2
BolC4t24415H Brassica oleracea HOM05D009053 ORTHO05D014846 3.4e-12 75.1 97 41.2
A03p68010 Brassica napus HOM05D009053 ORTHO05D014846 1.7e-11 72.8 93 40.9
BraA01t02672Z Brassica rapa HOM05D009053 ORTHO05D014846 1.7e-11 72.8 93 40.9
Thhalv10024151m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 7.0e-10 67.4 100 37.0
Sp2g03580 Schrenkiella parvula HOM05D009053 ORTHO05D014846 2.7e-09 65.5 100 38.0
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 1.0e-08 63.5 92 39.1
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 5.0e-08 61.2 92 39.1
CARHR056520 Cardamine hirsuta HOM05D010807 ORTHO05D010698 2.1e-06 55.8 100 34.0
CARHR290170 Cardamine hirsuta HOM05D010807 ORTHO05D010698 2.1e-06 55.8 90 36.7
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 3.6e-06 55.1 96 36.5
Carub.0007s2597 Capsella rubella HOM05D010807 ORTHO05D010698 4.7e-06 54.7 97 37.1
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 6.1e-06 54.3 97 37.1


User provided reference genes

Program Settings