Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G14680 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 2.1e-42 175.3 87 100.0
Sopen10g024670 Solanum pennellii HOM05D007599 ORTHO05D009548 3.5e-29 131.3 89 75.3
Thhalv10019387m.g Eutrema salsugineum HOM05D007599 ORTHO05D009548 4.6e-29 131.0 86 76.7
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 1.1e-27 126.3 83 75.9
EL10Ac5g12394 Beta vulgaris HOM05D007599 ORTHO05D009548 1.5e-27 125.9 88 68.2
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 3.3e-27 124.8 87 73.6
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 4.3e-27 124.4 88 73.9
PGSC0003DMG400012109 Solanum tuberosum HOM05D007599 ORTHO05D009548 4.3e-27 124.4 87 71.3
Sed0012861 Sechium edule HOM05D007599 ORTHO05D009548 5.6e-27 124.0 83 69.9
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 9.5e-27 123.2 87 72.4
unitig_62.g23260 Utricularia gibba HOM05D007599 ORTHO05D009548 1.2e-26 122.9 88 71.6
Solyc08g083380.2 Solanum lycopersicum HOM05D007599 ORTHO05D009548 1.6e-26 122.5 89 71.9
ClCG01G001340 Citrullus lanatus HOM05D007599 ORTHO05D009548 2.1e-26 122.1 83 69.9
Os02g0682600 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 2.8e-26 121.7 84 70.2
AUR62007084 Chenopodium quinoa HOM05D007599 ORTHO05D009548 6.2e-26 120.6 87 69.0
AUR62019947 Chenopodium quinoa HOM05D007599 ORTHO05D009548 6.2e-26 120.6 87 69.0
AT1G61570 Arabidopsis thaliana HOM05D007599 ORTHO05D009548 8.9e-25 116.7 88 69.3
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 8.9e-25 116.7 86 69.8
AagrBONN_evm.TU.Sc2ySwM_117.1837 Anthoceros agrestis HOM05D007599 ORTHO05D009548 3.4e-24 114.8 85 67.1
MELO3C005802.2 Cucumis melo HOM05D007599 ORTHO05D009548 5.8e-24 114.0 83 67.5
CsaV3_5G001470 Cucumis sativus L. HOM05D007599 ORTHO05D009548 5.8e-24 114.0 83 67.5
MSTRG.12224 Avicennia marina HOM05D007599 ORTHO05D009548 9.9e-24 113.2 78 71.8
Mapoly0015s0046 Marchantia polymorpha HOM05D007599 ORTHO05D009548 7.1e-22 107.1 85 61.2
Atru.chr9.1835 Acer truncatum HOM05D007599 ORTHO05D009548 1.2e-21 106.3 88 62.5
Pp3c25_10700 Physcomitrium patens HOM05D007599 ORTHO05D009548 2.1e-21 105.5 85 64.7
Duzib084G0922 Durio zibethinus HOM05D007599 ORTHO05D009548 5.1e-20 100.9 72 66.7
TPR.G21312 Trifolium pratense HOM05D007599 ORTHO05D009548 8.6e-20 100.1 84 50.0
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 1.5e-19 99.4 85 61.2
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 2.5e-19 98.6 88 59.1
FAN18G2966 Fragaria x ananassa HOM05D007599 ORTHO05D009548 3.3e-19 98.2 110 47.3
SGA_v2.0_scaffold88G27242 Striga asiatica HOM05D007599 ORTHO05D009548 3.3e-19 98.2 123 45.5
Carub.0002s0362 Capsella rubella HOM05D007599 ORTHO05D009548 1.6e-18 95.9 86 61.6
Migut.E00717 Erythranthe guttata HOM05D007599 ORTHO05D009548 6.2e-18 94.0 67 70.1
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 1.8e-17 92.4 83 59.0
FvH4_5g07140 Fragaria vesca HOM05D007599 ORTHO05D009548 5.2e-17 90.9 67 56.7
CAN.G567.112 Capsicum annuum HOM05D007599 ORTHO05D009548 3.4e-16 88.2 87 56.3
Rhsim02G0254600 Rhododendron simsii HOM05D007599 ORTHO05D009548 3.4e-16 88.2 47 87.2
FAN08G0537 Fragaria x ananassa HOM05D007599 ORTHO05D009548 5.8e-16 87.4 67 55.2
RcHm_v2.0_Chr7g0187811 Rosa chinensis HOM05D007599 ORTHO05D009548 5.8e-16 87.4 82 52.4
CDE09G0527 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 7.6e-16 87.0 87 56.3
PRCOL_00005458 Prasinoderma coloniale HOM05D007599 ORTHO05D009548 9.9e-16 86.7 73 49.3
FAN08G0181 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.2e-15 85.5 143 36.4
MCO15G174 Micromonas commoda HOM05D007599 ORTHO05D009548 2.2e-15 85.5 66 57.6
CDE11G1025 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 2.9e-15 85.1 87 54.0
FAN13G2393 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.9e-15 85.1 67 53.7
BcaC08g45594 Brassica carinata HOM05D007599 ORTHO05D009548 4.9e-15 84.3 89 57.3
Sp5g30310 Schrenkiella parvula HOM05D007599 ORTHO05D009548 6.4e-15 84.0 84 56.0
Os01g0932550 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 7.1e-14 80.5 47 76.6
Sabra16G0305100 Salix brachista HOM05D007599 ORTHO05D009548 7.1e-14 80.5 44 86.4
C06p32780 Brassica napus HOM05D007599 ORTHO05D009548 1.2e-13 79.7 86 51.2
BcaB02g07013 Brassica carinata HOM05D007599 ORTHO05D009548 2.7e-13 78.6 89 53.9
Manes.01G000403 Manihot esculenta HOM05D007599 ORTHO05D009548 4.6e-13 77.8 85 52.9
BolC6t38400H Brassica oleracea HOM05D007599 ORTHO05D009548 6.0e-13 77.4 86 50.0
BcaNung06629 Brassica carinata HOM05D007599 ORTHO05D009548 7.8e-13 77.0 89 52.8
CARHR050820 Cardamine hirsuta HOM05D007599 ORTHO05D009548 1.0e-12 76.6 86 50.0
Cre16.g650800 Chlamydomonas reinhardtii HOM05D007599 ORTHO05D009548 1.3e-12 76.3 83 39.8
COL.COLO4_10843 Corchorus olitorius HOM05D007599 ORTHO05D009548 1.3e-12 76.3 89 48.3
AagrBONN_evm.TU.Sc2ySwM_344.1292 Anthoceros agrestis HOM05D007599 ORTHO05D009548 1.7e-12 75.9 84 45.2
A07p29010 Brassica napus HOM05D007599 ORTHO05D009548 1.7e-12 75.9 86 50.0
BraA07t30541Z Brassica rapa HOM05D007599 ORTHO05D009548 1.7e-12 75.9 86 50.0
SHI06900 Sapria himalayana HOM05D007599 ORTHO05D009548 1.7e-12 75.9 46 71.7
AL1G56360 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 2.3e-12 75.5 36 100.0
Manes.02G000300 Manihot esculenta HOM05D007599 ORTHO05D009548 6.6e-12 73.9 84 50.0
FvH4_5g10420 Fragaria vesca HOM05D007599 ORTHO05D009548 8.7e-12 73.6 82 45.1
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 1.1e-11 73.2 87 49.4
BcaC08g46942 Brassica carinata HOM05D007599 ORTHO05D009548 1.5e-11 72.8 84 51.2
C06p49140 Brassica napus HOM05D007599 ORTHO05D009548 1.5e-11 72.8 84 51.2
BolC6t39948H Brassica oleracea HOM05D001180 ORTHO05D001055 1.5e-11 72.8 84 51.2
CiPaw.12G074700 Carya illinoinensis HOM05D007599 ORTHO05D009548 1.5e-11 72.8 86 47.7
Cc08_g17030 Coffea canephora HOM05D007599 ORTHO05D009548 2.5e-11 72.0 85 50.6
CANSAT21G1781 Cannabis sativa HOM05D007599 ORTHO05D009548 7.3e-11 70.5 85 43.5
Nitab4.5_0000357g0300 Nicotiana tabacum HOM05D007599 ORTHO05D009548 9.6e-11 70.1 87 47.1
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 3.6e-10 68.2 85 44.7
TWI81G0432 Tripterygium wilfordii HOM05D007599 ORTHO05D009548 4.8e-10 67.8 83 45.8
Gohir.D12G243500 Gossypium hirsutum HOM05D007599 ORTHO05D009548 8.1e-10 67.0 88 44.3
Gorai.008G260900 Gossypium raimondii HOM05D007599 ORTHO05D009548 8.1e-10 67.0 88 44.3
Aa31LG9G70 Aethionema arabicum HOM05D007599 ORTHO05D009548 1.1e-09 66.6 87 44.8
FAN13G0770 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.4e-09 65.5 36 77.8
TWI60G1211 Tripterygium wilfordii HOM05D007599 ORTHO05D009548 2.4e-09 65.5 83 45.8
FAN04G0849 Fragaria x ananassa HOM05D007599 ORTHO05D009548 3.1e-09 65.1 36 75.0
PSO135G0169 Papaver somniferum HOM05D007599 ORTHO05D009548 3.1e-09 65.1 83 45.8
PSO384G2353 Papaver somniferum HOM05D007599 ORTHO05D009548 3.1e-09 65.1 83 45.8
Haze_27758 Corylus avellana HOM05D007599 ORTHO05D009548 5.3e-09 64.3 62 41.9
Actinidia27277 Actinidia chinensis HOM05D007599 ORTHO05D009548 1.2e-08 63.2 84 42.9
CSS0029258 Camellia sinensis var. sinensis HOM05D007599 ORTHO05D009548 1.5e-08 62.8 84 44.0
CBR_g48723 Chara braunii HOM05D007599 ORTHO05D009548 1.5e-08 62.8 83 44.6
BraA07t31618Z Brassica rapa HOM05D001180 ORTHO05D001055 5.8e-08 60.8 76 48.7
TAR374G1499 Trochodendron aralioides HOM05D007599 ORTHO05D009548 7.6e-08 60.5 64 50.0
A07p40760 Brassica napus HOM05D001180 ORTHO05D001055 1.1e-06 56.6 44 68.2
MBI12_g00589_MAGBIO Magnolia biondii HOM05D007599 ORTHO05D009548 5.4e-06 54.3 47 57.4
Haze_09213 Corylus avellana HOM05D007599 ORTHO05D009548 9.3e-06 53.5 88 40.9


User provided reference genes

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