Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G14480 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 9.8e-52 206.5 100 100.0
Carub.0002s0338 Capsella rubella HOM05D012646 ORTHO05D017422 5.3e-29 131.0 102 70.6
Carub.0002s0346 Capsella rubella HOM05D012646 ORTHO05D017422 3.3e-23 111.7 102 60.8
AL2G14490 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 2.9e-19 98.6 86 57.0
Carub.0002s0341 Capsella rubella HOM05D012646 ORTHO05D017422 7.1e-18 94.0 98 52.0
Carub.0002s0340 Capsella rubella HOM05D012646 ORTHO05D017422 1.6e-17 92.8 97 54.6
AT1G61688 Arabidopsis thaliana HOM05D012646 ORTHO05D017422 6.0e-17 90.9 106 50.0
AL2G14460 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 7.9e-17 90.5 107 50.5
AL2G14470 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 2.5e-15 85.5 103 47.6
A09p26810 Brassica napus HOM05D009779 ORTHO05D013534 4.9e-11 71.2 90 44.4
BraA09t38252Z Brassica rapa HOM05D009779 ORTHO05D013534 4.9e-11 71.2 90 44.4
BolC3t15237H Brassica oleracea HOM05D009779 ORTHO05D013534 4.2e-10 68.2 90 42.2
C03p28770 Brassica napus HOM05D009779 ORTHO05D013534 1.6e-09 66.2 90 41.1
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 1.3e-08 63.2 92 39.1
C03p28790 Brassica napus HOM05D009779 ORTHO05D013534 1.3e-08 63.2 85 40.0
BolC3t15236H Brassica oleracea HOM05D009779 ORTHO05D013534 1.3e-08 63.2 90 40.0
A03p24160 Brassica napus HOM05D009779 ORTHO05D013534 3.0e-08 62.0 90 38.9
BraA03t11625Z Brassica rapa HOM05D009779 ORTHO05D013534 3.0e-08 62.0 90 38.9
Carub.0002s0345 Capsella rubella HOM05D012646 ORTHO05D114365 3.0e-08 62.0 92 43.5
CARHR037560 Cardamine hirsuta HOM05D009157 ORTHO05D011114 6.7e-08 60.8 88 37.5
Carub.0003s2867 Capsella rubella HOM05D009157 ORTHO05D011114 8.7e-08 60.5 89 34.8
A03p09040 Brassica napus HOM05D009779 ORTHO05D013534 1.1e-07 60.1 90 38.9
C03p10520 Brassica napus HOM05D009779 ORTHO05D013534 1.1e-07 60.1 90 38.9
Carub.0002s0343 Capsella rubella HOM05D012646 ORTHO05D114412 1.5e-07 59.7 93 44.1
AT5G59105 Arabidopsis thaliana HOM05D009997 ORTHO05D011114 3.3e-07 58.5 90 36.7
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 3.3e-07 58.5 90 35.6
Carub.0002s0344 Capsella rubella HOM05D012646 ORTHO05D114488 3.3e-07 58.5 93 43.0
CARHR136110 Cardamine hirsuta HOM05D009157 ORTHO05D011114 3.3e-07 58.5 88 37.5
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 7.4e-07 57.4 92 37.0
A06p16760 Brassica napus HOM05D009157 ORTHO05D011114 1.3e-06 56.6 88 36.4
BraA06t24784Z Brassica rapa HOM05D009157 ORTHO05D011114 1.3e-06 56.6 88 36.4
BolC3t13534H Brassica oleracea HOM05D009779 ORTHO05D013534 1.6e-06 56.2 88 38.6
BolC7t42591H Brassica oleracea HOM05D009997 ORTHO05D011114 1.6e-06 56.2 90 34.4
Carub.0004s2332 Capsella rubella HOM05D009157 ORTHO05D011114 6.2e-06 54.3 93 41.9


User provided reference genes

Program Settings